3580_YDR146C (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 3580_YDR146C T145973_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SWI5
M00020_2.00
Saccharomyces cerevisiae
NNKGCTGGTHN

NDACCAGCMNN
PBM
Badis et al.(2008)
SWI5_2037
0.823 0.968
SWI5
M07450_2.00
Saccharomyces cerevisiae
KGCTGGKH

DMCCAGCM
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0402.1
0.823 0.968
SWI5
M08516_2.00
Saccharomyces cerevisiae
KGCTGGKH

DMCCAGCM
Misc
DeBoer et al.(2011)
YDR146C_569
0.823 0.968
ACE2
M00033_2.00
Saccharomyces cerevisiae
NTGCTGGBYN

NRVCCAGCAN
PBM
Badis et al.(2008)
ACE2_2082
0.797 0.889
ACE2
M07463_2.00
Saccharomyces cerevisiae
NGCTGGB

VCCAGCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0267.1
0.797 0.889
ACE2
M08534_2.00
Saccharomyces cerevisiae
NGCTGGBH

DVCCAGCN
Misc
DeBoer et al.(2011)
YLR131C_1332
0.797 0.889
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
3580_YDR146C C2H2 ZF 480 504
3580_YDR146C C2H2 ZF 510 534
3580_YDR146C C2H2 ZF 543 559

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG011591.1 Alligator sinensis Alligator_sinensis_CCG011591.1 I 0.000
ENSAPLG00000007967 Anas platyrhynchos ENSAPLG00000007967 I 0.000
Afo_R003314 Aptenodytes forsteri Afo_R003314 I 0.000
ENSBTAP00000003221-D1 Bos grunniens ENSBTAP00000003221-D1 I 0.000
HES5 Bos taurus ENSBTAG00000002483 I 0.000
Brh_R011663 Buceros rhinoceros Brh_R011663 I 0.000
HES5 Callithrix jacchus ENSCJAG00000002549 I 0.000
Aan_R005913 Calypte anna Aan_R005913 I 0.000
HES5 Canis familiaris ENSCAFG00000019421 I 0.000
ENSCPOG00000027139 Cavia porcellus ENSCPOG00000027139 I 0.000
ENSCSAG00000000715 Chlorocebus sabaeus ENSCSAG00000000715 I 0.000
HES5 Erinaceus europaeus ENSEEUG00000008377 I 0.000
HES5 Gallus gallus ENSGALG00000001141 I 0.000
HES5 Gorilla gorilla ENSGGOG00000010276 I 0.000
HES5 Homo sapiens ENSG00000197921 D 0.000
ENSMMUG00000014688 Macaca mulatta ENSMMUG00000014688 I 0.000
ENSMEUG00000013913 Macropus eugenii ENSMEUG00000013913 I 0.000
HES5 Meleagris gallopavo ENSMGAG00000002009 I 0.000
HES5 Monodelphis domestica ENSMODG00000008212 I 0.000
Hes5 Mus musculus ENSMUSG00000048001 D 0.000
HES5 Otolemur garnettii ENSOGAG00000030950 I 0.000
ENSOARG00000018071 Ovis aries ENSOARG00000018071 I 0.000
HES5 Pan troglodytes ENSPTRG00000024233 I 0.000
ENSPANG00000022730 Papio anubis ENSPANG00000022730 I 0.000
HES5 Procavia capensis ENSPCAG00000001025 I 0.000
ENSSHAG00000014397 Sarcophilus harrisii ENSSHAG00000014397 I 0.000
HES5 Tursiops truncatus ENSTTRG00000003782 I 0.000
Tal_R007855 Tyto alba Tal_R007855 I 0.000