Hba_09212 (Heterorhabditis bacteriophora)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Hba_09212 T153747_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
blmp-1
M08103_2.00 		Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR		 ChIP-seq
Mathelier et al.(2014)
MA0537.1 		0.799 0.912
blmp-1
M08195_2.00 		Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB		 ChIP-seq
Contrino et al.(2012)
Mw137 		0.799 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hba_09212 C2H2 ZF 936 958
Hba_09212 C2H2 ZF 964 986
Hba_09212 C2H2 ZF 992 1014
Hba_09212 C2H2 ZF 1020 1042
Hba_09212 C2H2 ZF 1048 1069

Links

Other C2H2 ZF family TFs
Other Heterorhabditis bacteriophora TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_02710 Ancylostoma duodenale ANCDUO_02710 I 0.823
HPLM_0001789201 Haemonchus placei HPLM_0001789201 I 0.823
NBR_0002088601 Nippostrongylus brasiliensis NBR_0002088601 I 0.823
TELCIR_19105 Teladorsagia circumcincta TELCIR_19105 I 0.823
ANCCEY_05862 Ancylostoma ceylanicum ANCCEY_05862 I 0.823
HCOI00760100 Haemonchus contortus HCOI00760100 I 0.823
ANCCAN_13506 Ancylostoma caninum ANCCAN_13506 I 0.823
CRE29848 Caenorhabditis remanei CRE29848 I 0.801
CBN18993 Caenorhabditis brenneri CBN18993 I 0.799
blmp-1 Caenorhabditis elegans WBGene00003847 D 0.799
CBG02201 Caenorhabditis briggsae CBG02201 I 0.799
D917_07972 Trichinella nativa D917_07972 I 0.769
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I 0.766
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I 0.766
D918_01175 Trichuris suis D918_01175 I 0.766
L898_g18820 Steinernema monticolum L898_g18820 I 0.765
L889_g7623 Steinernema feltiae L889_g7623 I 0.765
EFV52614 Trichinella spiralis EFV52614 I 0.765
L596_g21750 Steinernema carpocapsae L596_g21750 I 0.765
L892_g2443 Steinernema scapterisci L892_g2443 I 0.765
L893_g23908 Steinernema glaseri L893_g23908 I 0.765
MhA1_Contig1748.frz3.gene3 Meloidogyne hapla MhA1_Contig1748.frz3.gene3 N 0.764
DME_0000608401 Dracunculus medinensis DME_0000608401 I 0.756