TELCIR_19105 (Teladorsagia circumcincta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TELCIR_19105 T157855_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
blmp-1
M08103_2.00 		Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR		 ChIP-seq
Mathelier et al.(2014)
MA0537.1 		0.797 0.904
blmp-1
M08195_2.00 		Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB		 ChIP-seq
Contrino et al.(2012)
Mw137 		0.797 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_19105 C2H2 ZF 12 34
TELCIR_19105 C2H2 ZF 40 62
TELCIR_19105 C2H2 ZF 68 90
TELCIR_19105 C2H2 ZF 96 118
TELCIR_19105 C2H2 ZF 124 145

Links

Other C2H2 ZF family TFs
Other Teladorsagia circumcincta TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_05862 Ancylostoma ceylanicum ANCCEY_05862 I 0.827
HCOI00760100 Haemonchus contortus HCOI00760100 I 0.827
HPLM_0001789201 Haemonchus placei HPLM_0001789201 I 0.827
ANCCAN_13506 Ancylostoma caninum ANCCAN_13506 I 0.827
ANCDUO_02710 Ancylostoma duodenale ANCDUO_02710 I 0.827
NBR_0002088601 Nippostrongylus brasiliensis NBR_0002088601 I 0.825
Hba_09212 Heterorhabditis bacteriophora Hba_09212 I 0.823
blmp-1 Caenorhabditis elegans WBGene00003847 D 0.797
CBN18993 Caenorhabditis brenneri CBN18993 I 0.797
CBG02201 Caenorhabditis briggsae CBG02201 I 0.797
CRE29848 Caenorhabditis remanei CRE29848 I 0.797
D917_07972 Trichinella nativa D917_07972 I 0.766
L892_g2443 Steinernema scapterisci L892_g2443 I 0.765
L893_g23908 Steinernema glaseri L893_g23908 I 0.765
L898_g18820 Steinernema monticolum L898_g18820 I 0.765
L889_g7623 Steinernema feltiae L889_g7623 I 0.765
L596_g21750 Steinernema carpocapsae L596_g21750 I 0.765
MhA1_Contig1748.frz3.gene3 Meloidogyne hapla MhA1_Contig1748.frz3.gene3 N 0.764
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I 0.764
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I 0.764
D918_01175 Trichuris suis D918_01175 I 0.764
EFV52614 Trichinella spiralis EFV52614 I 0.762
Minc14190 Meloidogyne incognita Minc14190 N 0.757
SMAR011793 Strigamia maritima SMAR011793 I 0.756