CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TELCIR_01018
(
Teladorsagia circumcincta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TELCIR_01018
T157802_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klu-2
M00645_2.00
Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN
PBM
Narasimhan et al.(2015)
pTH9354
0.777
0.812
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_01018
C2H2 ZF
212
234
YYCTICKKDFKRPDILSRHLRRH
TELCIR_01018
C2H2 ZF
240
262
FGCDSCGRYFSRSDHLRTHRRTH
TELCIR_01018
C2H2 ZF
268
291
YQCTICSYAARRRDVLTRHMSTRH
Links
Other
C2H2 ZF
family TFs
Other
Teladorsagia circumcincta
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI01254700
Haemonchus contortus
HCOI01254700
I
0.823
HPLM_0001133101
Haemonchus placei
HPLM_0001133101
I
0.823
ANCCAN_17930
Ancylostoma caninum
ANCCAN_17930
I
0.820
ANCCEY_13832
Ancylostoma ceylanicum
ANCCEY_13832
I
0.820
CJA33261
Caenorhabditis japonica
CJA33261
I
0.780
CBN19187
Caenorhabditis brenneri
CBN19187
I
0.777
CBN10213
Caenorhabditis brenneri
CBN10213
I
0.777
CRE07023
Caenorhabditis remanei
CRE07023
I
0.777
CBG12610
Caenorhabditis briggsae
CBG12610
I
0.777
klu-2
Caenorhabditis elegans
WBGene00022592
D
0.777
TCNE_0000622401
Toxocara canis
TCNE_0000622401
I
0.773
L889_g28325
Steinernema feltiae
L889_g28325
I
0.773
RSKR_0000033200
Rhabditophanes kr3021
RSKR_0000033200
N
0.773
scaffold607-EXSNAP2012.9
Pristionchus exspectatus
scaffold607-EXSNAP2012.9
N
0.770
GPLIN_001154300
Globodera pallida
GPLIN_001154300
N
0.770
GPLIN_000062600
Globodera pallida
GPLIN_000062600
N
0.770
PPA04971
Pristionchus pacificus
PPA04971
N
0.770
BXY_0680200
Bursaphelenchus xylophilus
BXY_0680200
I
0.760
ASU_05504
Ascaris suum
ASU_05504
I
0.760
L596_g11489
Steinernema carpocapsae
L596_g11489
I
0.760
L893_g30492
Steinernema glaseri
L893_g30492
I
0.757