CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PRUPE_ppa000912mg
(
Prunus persica
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03859 (CG-1)
IPR005559
PRUPE_ppa000912mg
T163345_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.819
0.819
CMTA3
M01900_2.00
Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB
PBM
Weirauch et al.(2014)
pTH8209
0.783
0.783
EICBP.B
M06828_2.00
Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH
Dap-seq
OMalley et al.(2016)
CAMTA1_col_a
0.783
0.783
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ26557
CG-1
4
87
LPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNSNFQRRSYWMLDMHLQHIVLVHYRNV
Links
Other
CG-1
family TFs
Other
Prunus persica
TFs
78 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.I02632
Eucalyptus grandis
Eucgr.I02632
I
0.904
Aquca_003_00380
Aquilegia coerulea
Aquca_003_00380
I
0.892
29889.m003372
Ricinus communis
29889.m003372
I
0.880
PRUPE_ppa000612mg
Prunus persica
PRUPE_ppa000612mg
I
0.855
Aquca_008_00132
Aquilegia coerulea
Aquca_008_00132
I
0.843
SELMODRAFT_413101
Selaginella moellendorffii
SELMODRAFT_413101
I
0.843
Gorai.008G089900
Gossypium raimondii
Gorai.008G089900
I
0.843
SELMODRAFT_441667
Selaginella moellendorffii
SELMODRAFT_441667
I
0.843
evm.TU.supercontig_213.9
Carica papaya
evm.TU.supercontig_213.9
I
0.831
Aquca_010_00201
Aquilegia coerulea
Aquca_010_00201
I
0.831
GSMUA_AchrUn_randomG02100_001
Musa acuminata
GSMUA_AchrUn_randomG02100_001
I
0.831
Solyc04g056270.2
Solanum lycopersicum
Solyc04g056270.2
I
0.831
GLYMA08G19101
Glycine max
GLYMA08G19101
I
0.831
POPTR_0010s16290
Populus trichocarpa
POPTR_0010s16290
I
0.831
Bostr.0568s0382
Boechera stricta
Bostr.0568s0382
I
0.819
Ca_05255
Cicer arietinum
Ca_05255
I
0.819
Sb01g044480
Sorghum bicolor
Sb01g044480
I
0.819
Cagra.0248s0103
Capsella grandiflora
Cagra.0248s0103
I
0.819
scaffold_803130.1
Arabidopsis lyrata
scaffold_803130.1
I
0.819
TCM_021468
Theobroma cacao
TCM_021468
I
0.819
Si034054m.g
Setaria italica
Si034054m.g
I
0.819
Carubv10025787m.g
Capsella rubella
Carubv10025787m.g
I
0.819
Gorai.013G061100
Gossypium raimondii
Gorai.013G061100
I
0.819
Gorai.005G220600
Gossypium raimondii
Gorai.005G220600
I
0.819
CMTA2
Arabidopsis thaliana
AT5G64220
D
0.819
OBART03G19880
Oryza barthii
OBART03G19880
I
0.807
AMTR_s00038p00173360
Amborella trichopoda
AMTR_s00038p00173360
I
0.807
Cla013051
Citrullus lanatus
Cla013051
I
0.807
Si028797m.g
Setaria italica
Si028797m.g
I
0.807
chr4.CM0182.510.nc
Lotus japonicus
chr4.CM0182.510.nc
I
0.807
BGIOSGA012779
Oryza indica
BGIOSGA012779
I
0.807
GLYMA05G31190
Glycine max
GLYMA05G31190
I
0.807
GSMUA_Achr1G21540_001
Musa acuminata
GSMUA_Achr1G21540_001
I
0.807
ONIVA03G21570
Oryza nivara
ONIVA03G21570
I
0.807
OMERI03G17850
Oryza meridionalis
OMERI03G17850
I
0.807
Eucgr.H04783
Eucalyptus grandis
Eucgr.H04783
I
0.807
LPERR03G05920
Leersia perrieri
LPERR03G05920
I
0.807
OGLUM03G20490
Oryza glumaepatula
OGLUM03G20490
I
0.807
ORUFI03G20520
Oryza rufipogon
ORUFI03G20520
I
0.807
GRMZM2G431243
Zea mays
GRMZM2G431243
I
0.798
chr4.LjT13D08.100.nd
Lotus japonicus
chr4.LjT13D08.100.nd
I
0.795
Traes_4BL_A37F6FD08
Triticum aestivum
Traes_4BL_A37F6FD08
I
0.795
Bra038534
Brassica rapa
Bra038534
I
0.795
OB03G16740
Oryza brachyantha
OB03G16740
I
0.795
MLOC_63299
Hordeum vulgare
MLOC_63299
I
0.795
GSMUA_AchrUn_randomG08930_001
Musa acuminata
GSMUA_AchrUn_randomG08930_001
I
0.795
CAMTA3
Vitis vinifera
VIT_07s0141g00250
I
0.789
MDP0000139862
Malus domestica
MDP0000139862
I
0.783
Sb02g039710
Sorghum bicolor
Sb02g039710
I
0.783
OLONG_003971
Oryza longistaminata
OLONG_003971
I
0.783
ONIVA10G07730
Oryza nivara
ONIVA10G07730
I
0.783
ORGLA10G0066800
Oryza glaberrima
ORGLA10G0066800
I
0.783
OBART10G08060
Oryza barthii
OBART10G08060
I
0.783
OB10G16130
Oryza brachyantha
OB10G16130
I
0.783
EICBP.B
Arabidopsis thaliana
AT5G09410
D
0.783
Bo4g149510
Brassica oleracea
Bo4g149510
I
0.783
LPERR10G05550
Leersia perrieri
LPERR10G05550
I
0.783
ORUFI10G08490
Oryza rufipogon
ORUFI10G08490
I
0.783
OGLUM10G07770
Oryza glumaepatula
OGLUM10G07770
I
0.783
OS10G0375600
Oryza sativa
OS10G0375600
I
0.783
GRMZM2G341747
Zea mays
GRMZM2G341747
I
0.771
Pavir.Ia02749
Panicum virgatum
Pavir.Ia02749
I
0.771
Pavir.Ib02991
Panicum virgatum
Pavir.Ib02991
I
0.771
Traes_5BL_92902F993
Triticum aestivum
Traes_5BL_92902F993
I
0.771
mgf024932m
Mimulus guttatus
mgf024932m
I
0.771
Sb0012s010230
Sorghum bicolor
Sb0012s010230
I
0.771
mgf010601m
Mimulus guttatus
mgf010601m
I
0.771
mgf015897m
Mimulus guttatus
mgf015897m
I
0.771
Pavir.Ib00572
Panicum virgatum
Pavir.Ib00572
I
0.759
Cla004910
Citrullus lanatus
Cla004910
N
0.759
Lus10003405.g
Linum usitatissimum
Lus10003405.g
I
0.747
CMTA3
Arabidopsis thaliana
AT2G22300
D
0.747
TRIUR3_23040
Triticum urartu
TRIUR3_23040
I
0.747
GSMUA_Achr3G21310_001
Musa acuminata
GSMUA_Achr3G21310_001
I
0.735
cassava42936.valid.m1
Manihot esculenta
cassava42936.valid.m1
N
0.723
Pm008450
Prunus mume
Pm008450
I
0.719
MTR_2g008840
Medicago truncatula
MTR_2g008840
I
0.713
GSMUA_Achr9G01330_001
Musa acuminata
GSMUA_Achr9G01330_001
N
0.711