ENSCJAG00000021979 (Callithrix jacchus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSCJAG00000021979 T164481_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.773 0.773
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000040658 CSD 40 112

Links

Other CSD family TFs
Other Callithrix jacchus TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lin28a Mus musculus ENSMUSG00000050966 I 0.909
Gfo_R011576 Geospiza fortis Gfo_R011576 I 0.892
ENSTGUG00000001037 Taeniopygia guttata ENSTGUG00000001037 I 0.892
Brh_R006709 Buceros rhinoceros Brh_R006709 I 0.892
Afo_R008930 Aptenodytes forsteri Afo_R008930 I 0.892
ENSACAG00000017764 Anolis carolinensis ENSACAG00000017764 I 0.892
LIN28A Ochotona princeps ENSOPRG00000001591 I 0.879
LIN28A Otolemur garnettii ENSOGAG00000003971 I 0.879
LIN28A Equus caballus ENSECAG00000020267 I 0.879
ENSPANG00000009841 Papio anubis ENSPANG00000009841 I 0.879
ENSPPYG00000001684 Pongo abelii ENSPPYG00000001684 I 0.879
LIN28A Dasypus novemcinctus ENSDNOG00000010710 I 0.879
ENSOCUG00000027786 Oryctolagus cuniculus ENSOCUG00000027786 I 0.879
ENSOCUG00000027473 Oryctolagus cuniculus ENSOCUG00000027473 I 0.879
ENSNLEG00000009294 Nomascus leucogenys ENSNLEG00000009294 I 0.879
LIN28A Felis catus ENSFCAG00000012810 I 0.879
LIN28A Homo sapiens ENSG00000131914 I 0.879
ENSMLUG00000010158 Myotis lucifugus ENSMLUG00000010158 I 0.879
LIN28A Loxodonta africana ENSLAFG00000017525 I 0.879
ENSOCUG00000000299 Oryctolagus cuniculus ENSOCUG00000000299 I 0.879
ENSOARG00000004614 Ovis aries ENSOARG00000004614 I 0.879
ENSMPUG00000015724 Mustela putorius furo ENSMPUG00000015724 I 0.879
Lin28a Rattus norvegicus ENSRNOG00000060320 I 0.879
ENSBTAG00000040497 Bos taurus ENSBTAG00000040497 I 0.879
ENSVPAG00000008073 Vicugna pacos ENSVPAG00000008073 I 0.879
LIN28A Canis familiaris ENSCAFG00000012488 I 0.879
ENSBTAP00000004196-D2 Bos grunniens ENSBTAP00000004196-D2 I 0.879
ENSP00000254231 Macaca fascicularis ENSP00000254231 I 0.879
ENSAMEG00000010582 Ailuropoda melanoleuca ENSAMEG00000010582 I 0.879
Myotis_brandtii_Lin28a_10029661 Myotis brandtii Myotis_brandtii_Lin28a_10029661 I 0.879
LIN28A Pteropus vampyrus ENSPVAG00000017267 I 0.879
LIN28A Tursiops truncatus ENSTTRG00000005678 I 0.879
LIN28A Gorilla gorilla ENSGGOG00000024918 I 0.879
ENSCSAG00000000975 Chlorocebus sabaeus ENSCSAG00000000975 I 0.879
ENSMEUG00000008743 Macropus eugenii ENSMEUG00000008743 I 0.879
LIN28A Sus scrofa ENSSSCG00000003557 I 0.879
LIN28A Callithrix jacchus ENSCJAG00000009796 I 0.879
ENSSTOG00000004329 Ictidomys tridecemlineatus ENSSTOG00000004329 I 0.879
ENSTSYG00000011513 Tarsius syrichta ENSTSYG00000011513 I 0.879
Ogr09706 Ophisaurus gracilis Ogr09706 I 0.865
ENSCPOG00000024027 Cavia porcellus ENSCPOG00000024027 I 0.864
LIN28A Pan troglodytes ENSPTRG00000000384 I 0.864
ENSOARG00000003913 Ovis aries ENSOARG00000003913 I 0.862
ENSBTAG00000048256 Bos taurus ENSBTAG00000048256 I 0.848
ENSCJAG00000022770 Callithrix jacchus ENSCJAG00000022770 I 0.848
yakG040859 Bos grunniens yakG040859 I 0.848
LIN28B Bos taurus ENSBTAG00000043973 I 0.838
LIN28B Myotis lucifugus ENSMLUG00000006883 I 0.838
LIN28A Choloepus hoffmanni ENSCHOG00000002073 I 0.833
LIN28A Monodelphis domestica ENSMODG00000014236 I 0.833
ENSCSAG00000014708 Chlorocebus sabaeus ENSCSAG00000014708 I 0.818
Aan_R005866 Calypte anna Aan_R005866 I 0.818
ENSGALG00000000388 Gallus gallus ENSGALG00000000388 I 0.818
ENSFALG00000000374 Ficedula albicollis ENSFALG00000000374 I 0.818
Myotis_brandtii_LIN28B_10034705 Myotis brandtii Myotis_brandtii_LIN28B_10034705 I 0.818
Alligator_sinensis_CCG010967.1 Alligator sinensis Alligator_sinensis_CCG010967.1 I 0.818
LIN28B Oryctolagus cuniculus ENSOCUG00000017850 I 0.818
LIN28A Meleagris gallopavo ENSMGAG00000009456 I 0.818
LIN28A Erinaceus europaeus ENSEEUG00000012085 I 0.812
Pvit_17184 Pogona vitticeps Pvit_17184 I 0.803
Cmyd_10009744 Chelonia mydas Cmyd_10009744 I 0.803
si:ch1073-284b18.2 Gasterosteus aculeatus ENSGACG00000013893 I 0.803
ENSONIG00000016204 Oreochromis niloticus ENSONIG00000016204 I 0.800
ENSXMAG00000014593 Xiphophorus maculatus ENSXMAG00000014593 I 0.800
ENSLOCG00000003353 Lepisosteus oculatus ENSLOCG00000003353 I 0.788
ENSAMXG00000001573 Astyanax mexicanus ENSAMXG00000001573 I 0.788
LIN28B Ornithorhynchus anatinus ENSOANG00000010299 I 0.788
si:ch1073-284b18.2 Takifugu rubripes ENSTRUG00000006069 I 0.788
ENSPFOG00000014054 Poecilia formosa ENSPFOG00000014054 I 0.788
LIN28A Danio rerio ENSDARG00000004328 I 0.785
ENSGMOG00000015660 Gadus morhua ENSGMOG00000015660 I 0.785
ENSSSCG00000004365 Sus scrofa ENSSSCG00000004365 I 0.773
ENSAMEG00000011453 Ailuropoda melanoleuca ENSAMEG00000011453 I 0.773
ENSMICG00000002297 Microcebus murinus ENSMICG00000002297 I 0.773
LIN28B Homo sapiens ENSG00000187772 D 0.773
LIN28B Loxodonta africana ENSLAFG00000017788 I 0.773
LIN28B Pteropus vampyrus ENSPVAG00000008797 I 0.773
ENSLACG00000004053 Latimeria chalumnae ENSLACG00000004053 I 0.773
LIN28B Callithrix jacchus ENSCJAG00000001671 I 0.773
LIN28B Sorex araneus ENSSARG00000008374 I 0.773
Pvit_09294 Pogona vitticeps Pvit_09294 I 0.773
LIN28B Choloepus hoffmanni ENSCHOG00000001682 I 0.773
LIN28B Tursiops truncatus ENSTTRG00000014919 I 0.773
LIN28B Canis familiaris ENSCAFG00000003598 I 0.773
ENSMPUG00000009489 Mustela putorius furo ENSMPUG00000009489 I 0.773
ENSTSYG00000006480 Tarsius syrichta ENSTSYG00000006480 I 0.773
ENSOARG00000011404 Ovis aries ENSOARG00000011404 I 0.773
LIN28B Macaca mulatta ENSMMUG00000014470 I 0.773
LIN28B Monodelphis domestica ENSMODG00000018035 I 0.773
LIN28B Pan troglodytes ENSPTRG00000018453 I 0.773
LIN28B Equus caballus ENSECAG00000020994 I 0.773
LIN28B Gorilla gorilla ENSGGOG00000015437 I 0.773
ENSMMUP00000018998 Macaca fascicularis ENSMMUP00000018998 I 0.773
ENSNLEG00000014146 Nomascus leucogenys ENSNLEG00000014146 I 0.773
LIN28B Otolemur garnettii ENSOGAG00000011042 I 0.773
LIN28B Echinops telfairi ENSETEG00000015340 I 0.773
ENSLACG00000002747 Latimeria chalumnae ENSLACG00000002747 I 0.773
si:ch1073-284b18.2 Oryzias latipes ENSORLG00000014369 I 0.773
LIN28B Ochotona princeps ENSOPRG00000006333 I 0.773
ENSPSIG00000002635 Pelodiscus sinensis ENSPSIG00000002635 I 0.773
ENSPPYG00000016875 Pongo abelii ENSPPYG00000016875 I 0.773
ENSPANG00000005196 Papio anubis ENSPANG00000005196 I 0.773
ENSBTAP00000053651-D1 Bos grunniens ENSBTAP00000053651-D1 I 0.773
LIN28B Dasypus novemcinctus ENSDNOG00000015300 I 0.773
LIN28B Felis catus ENSFCAG00000005058 I 0.773
Gfo_R012200 Geospiza fortis Gfo_R012200 I 0.758
ENSAMXG00000001433 Astyanax mexicanus ENSAMXG00000001433 I 0.758
Aan_R007025 Calypte anna Aan_R007025 I 0.758
Afo_R003680 Aptenodytes forsteri Afo_R003680 I 0.758
ENSAMXG00000016813 Astyanax mexicanus ENSAMXG00000016813 I 0.758
ENSAPLG00000014264 Anas platyrhynchos ENSAPLG00000014264 I 0.758
ENSSTOG00000002692 Ictidomys tridecemlineatus ENSSTOG00000002692 I 0.758
LIN28B Erinaceus europaeus ENSEEUG00000003632 I 0.758
LIN28B Cavia porcellus ENSCPOG00000006178 I 0.758
ENSFALG00000011574 Ficedula albicollis ENSFALG00000011574 I 0.758
LIN28B Taeniopygia guttata ENSTGUG00000012225 I 0.758
LIN28B Anolis carolinensis ENSACAG00000003957 I 0.758
lin28a Danio rerio ENSDARG00000016999 I 0.758
LIN28B Gallus gallus ENSGALG00000026761 I 0.758
ENSONIG00000014706 Oreochromis niloticus ENSONIG00000014706 I 0.745
ENSCJAG00000016916 Callithrix jacchus ENSCJAG00000016916 I 0.742
lin28a Xenopus tropicalis XB-GENE-491384 I 0.742
lin28a Gasterosteus aculeatus ENSGACG00000007826 I 0.742
ENSOCUG00000011640 Oryctolagus cuniculus ENSOCUG00000011640 I 0.734
lin28b.S Xenopus laevis XB-GENE-1218973 I 0.727
lin28b Xenopus tropicalis XB-GENE-1218969 I 0.727
ENSGMOG00000010704 Gadus morhua ENSGMOG00000010704 I 0.727
lin28a.S Xenopus laevis XB-GENE-866059 I 0.727
LIN28B Tetraodon nigroviridis ENSTNIG00000012302 I 0.727
lin28a Takifugu rubripes ENSTRUG00000009454 I 0.727
Lin28b Mus musculus ENSMUSG00000063804 I 0.712
LIN28B Oryzias latipes ENSORLG00000012891 I 0.712
Lin28b Rattus norvegicus ENSRNOG00000025938 I 0.712
LIN28B Takifugu rubripes ENSTRUG00000008428 I 0.712
ENSXMAG00000003450 Xiphophorus maculatus ENSXMAG00000003450 I 0.712
LIN28B Gasterosteus aculeatus ENSGACG00000009428 I 0.712