CBN23227 (Caenorhabditis brenneri)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		CBN23227 T166914_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
onecut
M03716_2.00 		Drosophila melanogaster
NNVRATCRATAHNN
NNDTATYGATYBNN		 SELEX
Nitta et al.(2015)
onecut_1 		0.713 0.713
onecut
M03717_2.00 		Drosophila melanogaster
NNTATYGATTWNN
NNWAATCRATANN		 SELEX
Nitta et al.(2015)
onecut_2 		0.713 0.713
onecut
M06472_2.00 		Drosophila melanogaster
HAATCAA
TTGATTD		 B1H
Mathelier et al.(2014)
MA0235.1 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN23227 CUT 326 404
CBN23227 Homeodomain 441 497

Links

Other CUT,Homeodomain family TFs
Other Caenorhabditis brenneri TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA03729 Caenorhabditis japonica CJA03729 I 0.993
ceh-38 Caenorhabditis elegans WBGene00000459 I 0.993
CBG11192 Caenorhabditis briggsae CBG11192 I 0.985
CRE26474 Caenorhabditis remanei CRE26474 I 0.985
scaffold421-EXSNAP2012.16 Pristionchus exspectatus scaffold421-EXSNAP2012.16 I 0.956
L889_g27415 Steinernema feltiae L889_g27415 I 0.949
L893_g20975 Steinernema glaseri L893_g20975 I 0.949
L898_g12845 Steinernema monticolum L898_g12845 I 0.949
DICVIV_06959 Dictyocaulus viviparus DICVIV_06959 I 0.941
ANCDUO_06286 Ancylostoma duodenale ANCDUO_06286 I 0.941
HCOI01220000 Haemonchus contortus HCOI01220000 I 0.941
L596_g1964 Steinernema carpocapsae L596_g1964 I 0.941
ASU_08868 Ascaris suum ASU_08868 I 0.940
EVEC_0000332701 Enterobius vermicularis EVEC_0000332701 I 0.926
nDi.2.2.2.g00186 Dirofilaria immitis nDi.2.2.2.g00186 I 0.926
EEL_0000016301 Elaeophora elaphi EEL_0000016301 I 0.926
DME_0000092301 Dracunculus medinensis DME_0000092301 I 0.926
BTMF_0001011301 Brugia timori BTMF_0001011301 I 0.926
LOAG_08712 Loa loa LOAG_08712 I 0.926
NECAME_06517 Necator americanus NECAME_06517 N 0.926
Bm3512 Brugia malayi Bm3512 I 0.926
nLs.2.1.2.g01435 Litomosoides sigmodontis nLs.2.1.2.g01435 I 0.926
nAv.1.0.1.g09678 Acanthocheilonema viteae nAv.1.0.1.g09678 I 0.926
WBGene00247461 Onchocerca volvulus WBGene00247461 I 0.926
SMUV_0000999101 Syphacia muris SMUV_0000999101 I 0.926
nOo.2.0.1.g10331 Onchocerca ochengi nOo.2.0.1.g10331 I 0.926
TCLT_0000779601 Thelazia callipaeda TCLT_0000779601 I 0.926
WUBG_00613 Wuchereria bancrofti WUBG_00613 N 0.912
Minc16757 Meloidogyne incognita Minc16757 I 0.897
GPLIN_001052100 Globodera pallida GPLIN_001052100 I 0.897
MhA1_Contig512.frz3.fgene1 Meloidogyne hapla MhA1_Contig512.frz3.fgene1 I 0.897
BXY_1717400 Bursaphelenchus xylophilus BXY_1717400 I 0.875
RSKR_0000794200 Rhabditophanes kr3021 RSKR_0000794200 N 0.853
L892_g29126 Steinernema scapterisci L892_g29126 N 0.824
ANCCEY_12232 Ancylostoma ceylanicum ANCCEY_12232 N 0.824
nRc.2.0.1.g02844 Romanomermis culicivorax nRc.2.0.1.g02844 N 0.778
PXEA_0000259701 Protopolystoma xenopodis PXEA_0000259701 I 0.736
ONECUT1 Erinaceus europaeus ENSEEUG00000010121 I 0.733
TMUE_s0014009100 Trichuris muris TMUE_s0014009100 I 0.731
TTRE_0000086601 Trichuris trichiura TTRE_0000086601 I 0.731
SMU15040257 Schmidtea mediterranea SMU15040257 I 0.728
A_00240 Schistosoma haematobium A_00240 I 0.724
D915_15034 Fasciola hepatica D915_15034 I 0.724
SROB_0000769301 Schistosoma rodhaini SROB_0000769301 I 0.724
SCUD_0001643701 Schistosoma curassoni SCUD_0001643701 I 0.724
SMTD_0000015201 Schistosoma mattheei SMTD_0000015201 I 0.724
SMRZ_0000163501 Schistosoma margrebowiei SMRZ_0000163501 I 0.724
Smp_196950 Schistosoma mansoni Smp_196950 I 0.724
Sjc_0006770 Schistosoma japonicum Sjc_0006770 I 0.724
Smp_013070 Schistosoma mansoni Smp_013070 I 0.724
ASU_11536 Ascaris suum ASU_11536 I 0.720
GG16442 Drosophila erecta FBgn0108673 I 0.719
GM26776 Drosophila sechellia FBgn0181629 I 0.719
ASIM_0001287801 Anisakis simplex ASIM_0001287801 I 0.719
LOAG_18692 Loa loa LOAG_18692 I 0.719
onecut Drosophila melanogaster FBgn0028996 D 0.719
TCLT_0000532001 Thelazia callipaeda TCLT_0000532001 I 0.719
csin111721 Clonorchis sinensis csin111721 I 0.716
CapteG52697 Capitella teleta CapteG52697 I 0.716
T265_01147 Opisthorchis viverrini T265_01147 I 0.716
HCOI00211900 Haemonchus contortus HCOI00211900 I 0.711
L889_g23716 Steinernema feltiae L889_g23716 I 0.711
CPIJ006386 Culex quinquefasciatus CPIJ006386 I 0.711
AGAP000061 Anopheles gambiae AGAP000061 I 0.711
L898_g28854 Steinernema monticolum L898_g28854 I 0.711
DAPPUDRAFT_32500 Daphnia pulex DAPPUDRAFT_32500 I 0.711
L596_g14922 Steinernema carpocapsae L596_g14922 I 0.711
L893_g27707 Steinernema glaseri L893_g27707 I 0.711
HCOI01108700 Haemonchus contortus HCOI01108700 I 0.711
DICVIV_04514 Dictyocaulus viviparus DICVIV_04514 I 0.711
PPAI010631 Phlebotomus papatasi PPAI010631 I 0.711
AMEC018792 Anopheles melas AMEC018792 I 0.711
ACHR009241 Anopheles christyi ACHR009241 I 0.711
AMEM014370 Anopheles merus AMEM014370 I 0.711
AAEL002359 Aedes aegypti AAEL002359 I 0.711
CpipJ_CPIJ006386 Culex pipiens CpipJ_CPIJ006386 I 0.711
GE14509 Drosophila yakuba FBgn0232113 I 0.711
AEPI005805 Anopheles epiroticus AEPI005805 I 0.711
AARA001117 Anopheles arabiensis AARA001117 I 0.711
LotgiG199735 Lottia gigantea LotgiG199735 I 0.709
csin107314 Clonorchis sinensis csin107314 I 0.709
onecut1.2 Xenopus tropicalis XB-GENE-1021674 I 0.709
T265_00751 Opisthorchis viverrini T265_00751 I 0.709
CRE24704 Caenorhabditis remanei CRE24704 I 0.706
AATE002650 Anopheles atroparvus AATE002650 I 0.706
AALB006352 Anopheles albimanus AALB006352 I 0.706
CBG05700 Caenorhabditis briggsae CBG05700 I 0.706
ADIR000966 Anopheles dirus ADIR000966 I 0.706
CRE22230 Caenorhabditis remanei CRE22230 I 0.706
AMIN002125 Anopheles minimus AMIN002125 I 0.706
tetur31g00520 Tetranychus urticae tetur31g00520 I 0.706
ADAC006269 Anopheles darlingi ADAC006269 I 0.706
HmN_000916800 Hymenolepis microstoma HmN_000916800 I 0.706
HNAJ_0001098701 Hymenolepis nana HNAJ_0001098701 I 0.706
ASIS013617 Anopheles sinensis ASIS013617 I 0.706
ASTEI06198 Anopheles stephensi ASTEI06198 I 0.706
AFUN011577 Anopheles funestus AFUN011577 I 0.706
ACYPI000169 Acyrthosiphon pisum ACYPI000169 I 0.704
SPER_0000877001 Spirometra erinaceieuropaei SPER_0000877001 I 0.704
SPER_0000876901 Spirometra erinaceieuropaei SPER_0000876901 I 0.704
GI14052 Drosophila mojavensis FBgn0136806 I 0.704
GK13692 Drosophila willistoni FBgn0215700 I 0.704
HMEL003746 Heliconius melpomene HMEL003746 I 0.704
KGM_19875 Danaus plexippus KGM_19875 I 0.704
GL18146 Drosophila persimilis FBgn0155749 I 0.704
GJ19930 Drosophila virilis FBgn0207072 I 0.704
GA15133 Drosophila pseudoobscura FBgn0075158 I 0.704
DILT_0001350901 Diphyllobothrium latum DILT_0001350901 I 0.702
TsM_001008400 Taenia solium TsM_001008400 I 0.701
Alligator_sinensis_CCG019829.1 Alligator sinensis Alligator_sinensis_CCG019829.1 I 0.701
MCOS_0000716501 Mesocestoides corti MCOS_0000716501 I 0.701
ECANG7_03124 Echinococcus canadensis ECANG7_03124 I 0.701
TASK_0000698901 Taenia asiatica TASK_0000698901 I 0.701
CGI_10019668 Crassostrea gigas CGI_10019668 I 0.701
ENSLACG00000011596 Latimeria chalumnae ENSLACG00000011596 I 0.701