GRMZM2G397616 (Zea mays)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GRMZM2G397616 T193572_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.829 0.889
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.829 0.889
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.809 0.889
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.809 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G397616_P01 GATA 130 165

Links

Other GATA family TFs
Other Zea mays TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10014541m.g Capsella rubella Carubv10014541m.g I 0.829
Bostr.18351s0307 Boechera stricta Bostr.18351s0307 I 0.829
Bra037221 Brassica rapa Bra037221 I 0.829
Thhalv10022854m.g Eutrema salsugineum Thhalv10022854m.g I 0.829
Bra039614 Brassica rapa Bra039614 I 0.829
GATA20 Arabidopsis lyrata Al_scaffold_0003_3815 I 0.829
GATA20 Arabidopsis thaliana AT2G18380 D 0.829
Bo9g026020 Brassica oleracea Bo9g026020 I 0.825
MTR_8g077510 Medicago truncatula MTR_8g077510 I 0.822
GRMZM2G325850 Zea mays GRMZM2G325850 I 0.820
orange1.1g030971m.g Citrus sinensis orange1.1g030971m.g I 0.810
Ciclev10003698m.g Citrus clementina Ciclev10003698m.g I 0.810
Carubv10007612m.g Capsella rubella Carubv10007612m.g I 0.809
Carubv10017765m.g Capsella rubella Carubv10017765m.g I 0.809
Ciclev10026328m.g Citrus clementina Ciclev10026328m.g I 0.809
Bostr.6864s0159 Boechera stricta Bostr.6864s0159 I 0.809
cassava21185.m1 Manihot esculenta cassava21185.m1 I 0.809
29634.m002146 Ricinus communis 29634.m002146 I 0.809
cassava5664.m1 Manihot esculenta cassava5664.m1 I 0.809
Cucsa.106490 Cucumis sativus Cucsa.106490 I 0.809
Bostr.7867s1518 Boechera stricta Bostr.7867s1518 I 0.809
mgf023982m Mimulus guttatus mgf023982m I 0.809
Cagra.0926s0051 Capsella grandiflora Cagra.0926s0051 I 0.809
Gorai.007G202900 Gossypium raimondii Gorai.007G202900 I 0.809
Thhalv10010986m.g Eutrema salsugineum Thhalv10010986m.g I 0.809
SapurV1A.0978s0140 Salix purpurea SapurV1A.0978s0140 I 0.809
SapurV1A.0254s0200 Salix purpurea SapurV1A.0254s0200 I 0.809
Thhalv10027520m.g Eutrema salsugineum Thhalv10027520m.g I 0.809
PK24471.1 Cannabis sativa PK24471.1 I 0.809
chr4.CM0283.270.nd Lotus japonicus chr4.CM0283.270.nd I 0.809
chr2.CM0249.1330.nc Lotus japonicus chr2.CM0249.1330.nc I 0.809
Pavir.Eb02678 Panicum virgatum Pavir.Eb02678 I 0.809
MDP0000310271 Malus domestica MDP0000310271 I 0.809
Gorai.003G014300 Gossypium raimondii Gorai.003G014300 I 0.809
gene14763-v1.0-hybrid Fragaria vesca gene14763-v1.0-hybrid I 0.809
Pm026628 Prunus mume Pm026628 I 0.809
Gorai.008G067800 Gossypium raimondii Gorai.008G067800 I 0.809
MDP0000253174 Malus domestica MDP0000253174 I 0.809
Lus10028301.g Linum usitatissimum Lus10028301.g I 0.809
evm.TU.supercontig_6.118 Carica papaya evm.TU.supercontig_6.118 I 0.809
MNP Vitis vinifera VIT_04s0023g01840 I 0.809
Cla014810 Citrullus lanatus Cla014810 I 0.809
GATA19 Arabidopsis lyrata fgenesh2_kg.7__409__AT4G36620.1 I 0.809
GLYMA11G07350 Glycine max GLYMA11G07350 I 0.809
GLYMA16G25370 Glycine max GLYMA16G25370 I 0.809
Bo7g064860 Brassica oleracea Bo7g064860 I 0.809
Bo7g100580 Brassica oleracea Bo7g100580 I 0.809
Bo7g118030 Brassica oleracea Bo7g118030 I 0.809
Bo8g080330 Brassica oleracea Bo8g080330 I 0.809
Bra012883 Brassica rapa Bra012883 I 0.809
Bra017766 Brassica rapa Bra017766 I 0.809
Bra036854 Brassica rapa Bra036854 I 0.809
MTR_5g020230 Medicago truncatula MTR_5g020230 I 0.809
PGSC0003DMG400003508 Solanum tuberosum PGSC0003DMG400003508 I 0.809
Solyc02g085190.1 Solanum lycopersicum Solyc02g085190.1 I 0.809
Solyc02g062760.2 Solanum lycopersicum Solyc02g062760.2 I 0.809
TCM_000376 Theobroma cacao TCM_000376 I 0.809
MNP Arabidopsis lyrata Al_scaffold_0005_1952 I 0.809
Ca_02038 Cicer arietinum Ca_02038 I 0.809
GATA18 Arabidopsis thaliana AT3G50870 I 0.809
GATA19 Arabidopsis thaliana AT4G36620 D 0.809
PGSC0003DMG400015502 Solanum tuberosum PGSC0003DMG400015502 I 0.809
POPTR_0005s12440 Populus trichocarpa POPTR_0005s12440 I 0.809
POPTR_0007s12930 Populus trichocarpa POPTR_0007s12930 I 0.809
PRUPE_ppa014930mg Prunus persica PRUPE_ppa014930mg I 0.809
Bra012080 Brassica rapa Bra012080 I 0.809
GLYMA02G06320 Glycine max GLYMA02G06320 I 0.808
MLOC_62522 Hordeum vulgare MLOC_62522 I 0.805
Sb09g029510 Sorghum bicolor Sb09g029510 I 0.805
Si022366m.g Setaria italica Si022366m.g I 0.805
Traes_1AL_A1EA76E83 Triticum aestivum Traes_1AL_A1EA76E83 I 0.805
F775_42893 Aegilops tauschii F775_42893 I 0.805
BRADI2G14890 Brachypodium distachyon BRADI2G14890 I 0.805
Pavir.J18346 Panicum virgatum Pavir.J18346 I 0.805
Bra010563 Brassica rapa Bra010563 I 0.805
Pavir.Ca00998 Panicum virgatum Pavir.Ca00998 I 0.805
Pavir.Ea02338 Panicum virgatum Pavir.Ea02338 I 0.805