EFA81457.1 (Polysphondylium pallidum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 EFA81457.1 T196867_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gtaN
M02014_2.00 		Dictyostelium discoideum
NNMGATNNN
NNNATCKNN		 PBM
Weirauch et al.(2014)
pTH5355 		0.867 1.000
gtaI
M02012_2.00 		Dictyostelium discoideum
VMGATCKV
BMGATCKB		 PBM
Weirauch et al.(2014)
pTH5406 		0.810 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFA81457.1 GATA 653 688

Links

Other GATA family TFs
Other Polysphondylium pallidum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gtaN Dictyostelium discoideum DDB_G0287057 D 0.867
estExt_fgeneshDP_pg.C_5480001 Dictyostelium purpureum estExt_fgeneshDP_pg.C_5480001 I 0.865
EFA77221.1 Polysphondylium pallidum EFA77221.1 I 0.837
gtaK Dictyostelium discoideum DDB_G0282811 I 0.837
M408DRAFT_61538 Serendipita vermifera M408DRAFT_61538 I 0.836
estExt_Genewise1Plus.C_1210006 Dictyostelium purpureum estExt_Genewise1Plus.C_1210006 I 0.810
gtaI Dictyostelium discoideum DDB_G0281661 D 0.810
LALA0_S07e00188g Lachancea lanzarotensis LALA0_S07e00188g I 0.810
Kwal_1746 Kluyveromyces waltii Kwal_1746 I 0.805
KLTH0H06314g Kluyveromyces thermotolerans KLTH0H06314g I 0.805
Kpol_385p3 Vanderwaltozyma polyspora Kpol_385p3 I 0.805
RHTO_02844 Rhodosporidium toruloides RHTO_02844 I 0.805
KLTH0H06314g Lachancea thermotolerans KLTH0H06314g I 0.805