POPTR_0005s18920 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0005s18920 T201195_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s18920.1 GRAS 52 455

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0116s0200 Salix purpurea SapurV1A.0116s0200 N 0.882
POPTR_0007s10030 Populus trichocarpa POPTR_0007s10030 N 0.849
29661.m000901 Ricinus communis 29661.m000901 N 0.828
VIT_07s0129g00340 Vitis vinifera VIT_07s0129g00340 N 0.828
cassava10176.m1 Manihot esculenta cassava10176.m1 N 0.825
cassava8647.m1 Manihot esculenta cassava8647.m1 N 0.825
Pm002406 Prunus mume Pm002406 N 0.817
MDP0000247514 Malus domestica MDP0000247514 N 0.809
PRUPE_ppa005079mg Prunus persica PRUPE_ppa005079mg N 0.809
gene05720-v1.0-hybrid Fragaria vesca gene05720-v1.0-hybrid N 0.798
TCM_000764 Theobroma cacao TCM_000764 N 0.796
Aquca_042_00139 Aquilegia coerulea Aquca_042_00139 N 0.793
Gorai.007G221900 Gossypium raimondii Gorai.007G221900 N 0.785
orange1.1g043764m.g Citrus sinensis orange1.1g043764m.g N 0.774
Ciclev10025567m.g Citrus clementina Ciclev10025567m.g N 0.774
evm.TU.supercontig_6.41 Carica papaya evm.TU.supercontig_6.41 N 0.755
Eucgr.H02292 Eucalyptus grandis Eucgr.H02292 N 0.750
chr4.CM0128.430.nc Lotus japonicus chr4.CM0128.430.nc N 0.747
Solyc02g092570.1 Solanum lycopersicum Solyc02g092570.1 N 0.739
PGSC0003DMG400024937 Solanum tuberosum PGSC0003DMG400024937 N 0.737
Gorai.007G056200 Gossypium raimondii Gorai.007G056200 N 0.729
GLYMA05G22140 Glycine max GLYMA05G22140 N 0.729
GLYMA17G17710 Glycine max GLYMA17G17710 N 0.723
MTR_4g095500 Medicago truncatula MTR_4g095500 N 0.720
Cucsa.103040 Cucumis sativus Cucsa.103040 N 0.712
Traes_2DS_FB1D2D1A7 Triticum aestivum Traes_2DS_FB1D2D1A7 N 0.709
PK13595.1 Cannabis sativa PK13595.1 N 0.701