Pm002406 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm002406 T201953_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm002406 GRAS 57 476

Links

Other GRAS family TFs
Other Prunus mume TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa005079mg Prunus persica PRUPE_ppa005079mg N 0.984
MDP0000247514 Malus domestica MDP0000247514 N 0.954
gene05720-v1.0-hybrid Fragaria vesca gene05720-v1.0-hybrid N 0.909
Traes_2AS_E17243D52 Triticum aestivum Traes_2AS_E17243D52 N 0.907
VIT_07s0129g00340 Vitis vinifera VIT_07s0129g00340 N 0.847
29661.m000901 Ricinus communis 29661.m000901 N 0.822
cassava10176.m1 Manihot esculenta cassava10176.m1 N 0.820
POPTR_0005s18920 Populus trichocarpa POPTR_0005s18920 N 0.817
Aquca_042_00139 Aquilegia coerulea Aquca_042_00139 N 0.812
SapurV1A.0116s0200 Salix purpurea SapurV1A.0116s0200 N 0.809
TCM_000764 Theobroma cacao TCM_000764 N 0.808
cassava8647.m1 Manihot esculenta cassava8647.m1 N 0.806
POPTR_0007s10030 Populus trichocarpa POPTR_0007s10030 N 0.805
Gorai.007G221900 Gossypium raimondii Gorai.007G221900 N 0.788
Ciclev10025567m.g Citrus clementina Ciclev10025567m.g N 0.782
orange1.1g043764m.g Citrus sinensis orange1.1g043764m.g N 0.782
evm.TU.supercontig_6.41 Carica papaya evm.TU.supercontig_6.41 N 0.780
chr4.CM0128.430.nc Lotus japonicus chr4.CM0128.430.nc N 0.778
Solyc02g092570.1 Solanum lycopersicum Solyc02g092570.1 N 0.770
PGSC0003DMG400024937 Solanum tuberosum PGSC0003DMG400024937 N 0.768
Eucgr.H02292 Eucalyptus grandis Eucgr.H02292 N 0.754
GLYMA05G22140 Glycine max GLYMA05G22140 N 0.753
mgf018442m Mimulus guttatus mgf018442m N 0.747
Gorai.007G056200 Gossypium raimondii Gorai.007G056200 N 0.745
MTR_4g095500 Medicago truncatula MTR_4g095500 N 0.744
PK13595.1 Cannabis sativa PK13595.1 N 0.739
GLYMA17G17710 Glycine max GLYMA17G17710 N 0.739
Cucsa.103040 Cucumis sativus Cucsa.103040 N 0.718
Cla014227 Citrullus lanatus Cla014227 N 0.715