POPTR_0002s22800 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0002s22800 T222485_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s22800.2 Homeodomain 754 817

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0053s0310 Salix purpurea SapurV1A.0053s0310 N 0.845
SapurV1A.1056s0040 Salix purpurea SapurV1A.1056s0040 N 0.844
evm.TU.supercontig_60.39 Carica papaya evm.TU.supercontig_60.39 N 0.802
BGIOSGA019308 Oryza indica BGIOSGA019308 N 0.748
ORGLA05G0052500 Oryza glaberrima ORGLA05G0052500 N 0.748
OS05G0188600 Oryza sativa OS05G0188600 N 0.748
Gorai.009G451700 Gossypium raimondii Gorai.009G451700 N 0.738
Si025937m.g Setaria italica Si025937m.g N 0.727
Sb05g025680 Sorghum bicolor Sb05g025680 N 0.710
Pavir.J17044 Panicum virgatum Pavir.J17044 N 0.692
Pavir.Hb00221 Panicum virgatum Pavir.Hb00221 N 0.692
BRADI4G36300 Brachypodium distachyon BRADI4G36300 N 0.672
GRMZM2G001777 Zea mays GRMZM2G001777 N 0.661