Pavir.J17044 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.J17044 T229346_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J17044.1.p Homeodomain 153 216

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Hb00221 Panicum virgatum Pavir.Hb00221 N 0.867
Sb05g025680 Sorghum bicolor Sb05g025680 N 0.834
Si025937m.g Setaria italica Si025937m.g N 0.825
GRMZM2G001777 Zea mays GRMZM2G001777 N 0.811
BGIOSGA019308 Oryza indica BGIOSGA019308 N 0.802
ORGLA05G0052500 Oryza glaberrima ORGLA05G0052500 N 0.802
OS05G0188600 Oryza sativa OS05G0188600 N 0.802
BRADI4G36300 Brachypodium distachyon BRADI4G36300 N 0.723
SapurV1A.1056s0040 Salix purpurea SapurV1A.1056s0040 N 0.693
SapurV1A.0053s0310 Salix purpurea SapurV1A.0053s0310 N 0.692
POPTR_0002s22800 Populus trichocarpa POPTR_0002s22800 N 0.692
GRMZM2G339848 Zea mays GRMZM2G339848 N 0.673
evm.TU.supercontig_60.39 Carica papaya evm.TU.supercontig_60.39 N 0.655
Gorai.009G451700 Gossypium raimondii Gorai.009G451700 N 0.633