CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.1056s0040
(
Salix purpurea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SapurV1A.1056s0040
T229503_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.1056s0040.1.p
Homeodomain
726
789
KRKRTIMNDYQIALMEKALLDEPEMQRNAAALQSWSDKLSLNGSEVTPSQLKNWLNNRKARLAR
Links
Other
Homeodomain
family TFs
Other
Salix purpurea
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0053s0310
Salix purpurea
SapurV1A.0053s0310
N
0.864
POPTR_0002s22800
Populus trichocarpa
POPTR_0002s22800
N
0.844
evm.TU.supercontig_60.39
Carica papaya
evm.TU.supercontig_60.39
N
0.780
Gorai.009G451700
Gossypium raimondii
Gorai.009G451700
N
0.736
BGIOSGA019308
Oryza indica
BGIOSGA019308
N
0.729
Si025937m.g
Setaria italica
Si025937m.g
N
0.729
ORGLA05G0052500
Oryza glaberrima
ORGLA05G0052500
N
0.729
OS05G0188600
Oryza sativa
OS05G0188600
N
0.729
Sb05g025680
Sorghum bicolor
Sb05g025680
N
0.712
Pavir.J17044
Panicum virgatum
Pavir.J17044
N
0.693
Pavir.Hb00221
Panicum virgatum
Pavir.Hb00221
N
0.693
GRMZM2G001777
Zea mays
GRMZM2G001777
N
0.662
BRADI4G36300
Brachypodium distachyon
BRADI4G36300
N
0.650