Gorai.009G451700 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.009G451700 T228785_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G451700.1 Homeodomain 697 760
Gorai.009G451700.2 Homeodomain 667 730
Gorai.009G451700.3 Homeodomain 697 760
Gorai.009G451700.4 Homeodomain 697 760
Gorai.009G451700.5 Homeodomain 686 749
Gorai.009G451700.7 Homeodomain 523 586

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_60.39 Carica papaya evm.TU.supercontig_60.39 N 0.767
SapurV1A.0053s0310 Salix purpurea SapurV1A.0053s0310 N 0.739
POPTR_0002s22800 Populus trichocarpa POPTR_0002s22800 N 0.738
SapurV1A.1056s0040 Salix purpurea SapurV1A.1056s0040 N 0.736
BRADI4G36300 Brachypodium distachyon BRADI4G36300 N 0.641
Pavir.J17044 Panicum virgatum Pavir.J17044 N 0.633
Pavir.Hb00221 Panicum virgatum Pavir.Hb00221 N 0.633
Si025937m.g Setaria italica Si025937m.g N 0.627
OS05G0188600 Oryza sativa OS05G0188600 N 0.627
BGIOSGA019308 Oryza indica BGIOSGA019308 N 0.627
ORGLA05G0052500 Oryza glaberrima ORGLA05G0052500 N 0.627
Sb05g025680 Sorghum bicolor Sb05g025680 N 0.610