CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DICVIV_03222
(
Dictyocaulus viviparus
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
DICVIV_03222
T237843_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg-1
M00680_2.00
Caenorhabditis elegans
NNTAATYNN
NNRATTANN
PBM
Narasimhan et al.(2015)
pTH10787
0.744
0.744
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DICVIV_03222
Paired box
3
67
SEAIHQKSGGTGTKPKVATPQVVAKIEQYKRDNPTIFAWEIRERLINEAVCSTPPSVSSINRILR
DICVIV_03222
Homeodomain
160
216
RCGRSSFSQEQLEMLESLFLKDPYPSAAQRMELVKSTQLPEARIQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Dictyocaulus viviparus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_21794
Ancylostoma caninum
ANCCAN_21794
N
0.860
ANCCEY_03349
Ancylostoma ceylanicum
ANCCEY_03349
N
0.777
PEQ_0001032101
Parascaris equorum
PEQ_0001032101
N
0.759
ASU_08722
Ascaris suum
ASU_08722
I
0.758
TCNE_0000883101
Toxocara canis
TCNE_0000883101
I
0.746
CRE07683
Caenorhabditis remanei
CRE07683
I
0.713