Pou3f2 (Rattus norvegicus)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSRNOG00000006908 T238580_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
binds DNA; may act as a transcription factor during neurogenesis [RGD, Feb 2006]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Pou3f2
M00552_2.00
Mus musculus
NWWATBNN

NNVATWWN
PBM
Berger et al.(2008)
Pou3f2_2824
1.000 1.000
POU3F2
M03313_2.00
Homo sapiens
HWTGMATAWWTWA

TWAWWTATKCAWD
SELEX
Jolma et al.(2013)
POU3F2_1
1.000 1.000
POU3F2
M03314_2.00
Homo sapiens
WTATGYWAATKW

WMATTWRCATAW
SELEX
Jolma et al.(2013)
POU3F2_2
1.000 1.000
POU3F2
M05473_2.00
Homo sapiens
NTAATKAKATGCRN

NYGCATMTMATTAN
SELEX
Yin et al.(2017)
POU3F2_eDBD_HT-SELEX_1
1.000 1.000
POU3F2
M05474_2.00
Homo sapiens
NYGCATWMATTAN

NTAATKWATGCRN
SELEX
Yin et al.(2017)
POU3F2_eDBD_HT-SELEX_2
1.000 1.000
POU3F2
M05475_2.00
Homo sapiens
DHATGYGCATNH

DNATGCRCATDH
SELEX
Yin et al.(2017)
POU3F2_eDBD_HT-SELEX_3
1.000 1.000
POU3F2
M05476_2.00
Homo sapiens
DTATGCWAATKAV

BTMATTWGCATAH
SELEX
Yin et al.(2017)
POU3F2_eDBD_HT-SELEX_4
1.000 1.000
POU3F2
M05477_2.00
Homo sapiens
TAATKMNNNNNNTMATKA

TMATKANNNNNNKMATTA
SELEX
Yin et al.(2017)
POU3F2_eDBD_HT-SELEX_5
1.000 1.000
POU3F2
M09220_2.00
Homo sapiens
YHCATKMMWWWBYMWNN

NNWKRVWWWKKMATGDR
Misc
Kulakovskiy et al.(2013)
PO3F2_HUMAN.H11MO.0.A
1.000 1.000
Pou3f2
M09228_2.00
Mus musculus
HWCATGMATATKYAWD

HWTRMATATKCATGWD
Misc
Kulakovskiy et al.(2013)
PO3F2_MOUSE.H11MO.0.A
1.000 1.000
POU3F2
M10843_2.00
Homo sapiens
NNCATBSDWAATVMRH

DYKBATTWHSVATGNN
Transfac
Matys et al.(2006)
V$BRN2_01
1.000 1.000
POU3F2
M10844_2.00
Homo sapiens
ATGMATWWATTCAT

ATGAATWWATKCAT
Transfac
Matys et al.(2006)
V$POU3F2_01
1.000 1.000
POU3F2
M10845_2.00
Homo sapiens
TTATGYTAAT

ATTARCATAA
Transfac
Matys et al.(2006)
V$POU3F2_02
1.000 1.000
POU3F2
M10846_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU3F2_Q2
1.000 1.000
POU3F2
M05478_2.00
Homo sapiens
NTAATGAKATGCGH

DCGCATMTCATTAN
SELEX
Yin et al.(2017)
POU3F2_eDBD_Methyl-HT-SELEX_1
1.000 1.000
POU3F2
M05479_2.00
Homo sapiens
RCGCATAAATTAN

NTAATTTATGCGY
SELEX
Yin et al.(2017)
POU3F2_eDBD_Methyl-HT-SELEX_2
1.000 1.000
POU3F2
M05480_2.00
Homo sapiens
DHATGCGCATDH

DHATGCGCATDH
SELEX
Yin et al.(2017)
POU3F2_eDBD_Methyl-HT-SELEX_3
1.000 1.000
POU3F2
M05481_2.00
Homo sapiens
WTATGCWAATKAG

CTMATTWGCATAW
SELEX
Yin et al.(2017)
POU3F2_eDBD_Methyl-HT-SELEX_4
1.000 1.000
POU3F2
M05482_2.00
Homo sapiens
TAATKANNNNNTAATKA

TMATTANNNNNTMATTA
SELEX
Yin et al.(2017)
POU3F2_eDBD_Methyl-HT-SELEX_5
1.000 1.000
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000009043 POU 267 338
ENSRNOP00000009043 Homeodomain 357 413

Links

Other Homeodomain,POU family TFs
Other Rattus norvegicus TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSPPYG00000016860 Pongo abelii ENSPPYG00000016860 I 1.000
POU3F2 Pan troglodytes ENSPTRG00000029496 I 1.000
POU3F2 Procavia capensis ENSPCAG00000008737 I 1.000
ENSPANG00000006100 Papio anubis ENSPANG00000006100 I 1.000
Pou3f2 Mus musculus ENSMUSG00000095139 D 1.000
POU3F2 Otolemur garnettii ENSOGAG00000024248 I 1.000
POU3F2 Sus scrofa ENSSSCG00000004346 I 1.000
Alligator_sinensis_CCG004860.1 Alligator sinensis Alligator_sinensis_CCG004860.1 I 1.000
Pvit_09307 Pogona vitticeps Pvit_09307 I 1.000
XP_002934918 Xenopus tropicalis XP_002934918 I 1.000
Ogr12763 Ophisaurus gracilis Ogr12763 I 1.000
Myotis_brandtii_Pou3f2_10025237 Myotis brandtii Myotis_brandtii_Pou3f2_10025237 I 1.000
Cmyd_10012071 Chelonia mydas Cmyd_10012071 I 1.000
ENSMPUG00000001529 Mustela putorius furo ENSMPUG00000001529 I 1.000
POU3F2 Monodelphis domestica ENSMODG00000018122 I 1.000
ENSCJAG00000001286 Callithrix jacchus ENSCJAG00000001286 I 1.000
ENSCPOG00000003168 Cavia porcellus ENSCPOG00000003168 I 1.000
POU3F2 Canis familiaris ENSCAFG00000029595 I 1.000
ENSBTAG00000024773 Bos taurus ENSBTAG00000024773 I 1.000
POU3F2 Anolis carolinensis ENSACAG00000023192 I 1.000
ENSAMEG00000011263 Ailuropoda melanoleuca ENSAMEG00000011263 I 1.000
ENSCSAG00000018978 Chlorocebus sabaeus ENSCSAG00000018978 I 1.000
POU3F2 Dasypus novemcinctus ENSDNOG00000007219 I 1.000
POU3F2 Gorilla gorilla ENSGGOG00000028066 I 1.000
POU3F2 Myotis lucifugus ENSMLUG00000016141 I 1.000
POU3F2 Homo sapiens ENSG00000184486 D 1.000
POU3F2 Echinops telfairi ENSETEG00000020341 I 1.000
ENSECAG00000015143 Equus caballus ENSECAG00000015143 I 1.000
ENSACAG00000008907 Anolis carolinensis ENSACAG00000008907 I 1.000