ENSONIG00000006624 (Oreochromis niloticus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSONIG00000006624 T244272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Irf9
M00173_2.00
Mus musculus
NNNRAAANN

NNTTTYNNN
PBM
Badis et al.(2009)
Isgf3g_2853
0.731 0.731
Irf9
M09240_2.00
Mus musculus
GAAABHGAAAYT

ARTTTCDVTTTC
Misc
Kulakovskiy et al.(2013)
IRF9_MOUSE.H11MO.0.C
0.731 0.731
IRF9
M02257_2.00
Ochotona princeps
DNYRAAAVND

HNBTTTYRNH
PBM
Weirauch et al.(2014)
pTH9337
0.702 0.702
IRF9
M02258_2.00
Sus scrofa
WNYGAAASY

RSTTTCRNW
PBM
Weirauch et al.(2014)
pTH9287
0.702 0.702
IRF8
M03335_2.00
Homo sapiens
HCGAAACYGAAACY

RGTTTCRGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_1
0.702 0.702
IRF8
M03336_2.00
Homo sapiens
HCGAAACCGAAACT

AGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_2
0.702 0.702
IRF8
M05541_2.00
Homo sapiens
NYGAAASYGAAASHN

NDSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX
0.702 0.702
IRF8
M05543_2.00
Homo sapiens
NCGAAACYGAAACYN

NRGTTTCRGTTTCGN
SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX
0.702 0.702
IRF8
M09236_2.00
Homo sapiens
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B
0.702 0.702
Irf8
M09246_2.00
Mus musculus
NDDDRRGGAASTGAAASYNN

NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A
0.702 0.702
IRF8
M10890_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ICSBP_Q6
0.702 0.702
IRF8
M10891_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF8_Q6
0.702 0.702
IRF8
M05542_2.00
Homo sapiens
NYGAAASYGAAASYN

NRSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX
0.702 0.702
IRF8
M05544_2.00
Homo sapiens
NYGAAASYGAAACYD

HRGTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX
0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000008369 IRF 11 115
ENSONIP00000008370 IRF 11 115

Links

Other IRF family TFs
Other Oreochromis niloticus TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009222 Calypte anna Aan_R009222 I 0.702
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.712
Alligator_sinensis_CCG003072.1 Alligator sinensis Alligator_sinensis_CCG003072.1 I 0.712
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.712
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.712
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.712
ENSACAG00000003946 Anolis carolinensis ENSACAG00000003946 I 0.712
ENSAMEG00000016347 Ailuropoda melanoleuca ENSAMEG00000016347 I 0.712
ENSAMXG00000004911 Astyanax mexicanus ENSAMXG00000004911 I 0.779
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.702
ENSCSAG00000016071 Chlorocebus sabaeus ENSCSAG00000016071 I 0.721
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I 0.712
ENSGMOG00000002167 Gadus morhua ENSGMOG00000002167 I 0.817
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.750
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.702
ENSLOCG00000001187 Lepisosteus oculatus ENSLOCG00000001187 I 0.821
ENSMEUG00000010784 Macropus eugenii ENSMEUG00000010784 I 0.702
ENSMMUG00000012474 Macaca mulatta ENSMMUG00000012474 I 0.712
ENSMPUG00000005961 Mustela putorius furo ENSMPUG00000005961 I 0.702
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.712
ENSNLEG00000015294 Nomascus leucogenys ENSNLEG00000015294 I 0.712
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.702
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.702
ENSP00000380073 Macaca fascicularis ENSP00000380073 I 0.712
ENSPFOG00000021810 Poecilia formosa ENSPFOG00000021810 I 0.894
ENSPPYG00000005686 Pongo abelii ENSPPYG00000005686 I 0.721
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.712
ENSSHAG00000001872 Sarcophilus harrisii ENSSHAG00000001872 I 0.702
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.702
ENSSTOG00000023450 Ictidomys tridecemlineatus ENSSTOG00000023450 I 0.712
ENSTNIG00000002469 Tetraodon nigroviridis ENSTNIG00000002469 I 0.841
ENSTSYG00000007445 Tarsius syrichta ENSTSYG00000007445 I 0.721
ENSXMAG00000004567 Xiphophorus maculatus ENSXMAG00000004567 I 0.885
Irf8 Mus musculus ENSMUSG00000041515 D 0.702
irf8 Gasterosteus aculeatus ENSGACG00000015958 I 0.702
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.702
IRF8 Gallus gallus ENSGALG00000005757 I 0.712
IRF8 Bos taurus ENSBTAG00000017824 I 0.702
IRF8 Homo sapiens ENSG00000140968 D 0.702
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.702
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.702
irf8.L Xenopus laevis XB-GENE-985949 I 0.721
irf9 Tetraodon nigroviridis ENSTNIG00000008698 I 0.865
irf9 Takifugu rubripes ENSTRUG00000017722 I 0.875
IRF9 Felis catus ENSFCAG00000018849 I 0.712
IRF9 Oryctolagus cuniculus ENSOCUG00000028186 I 0.731
IRF9 Callithrix jacchus ENSCJAG00000007065 I 0.731
IRF9 Cavia porcellus ENSCPOG00000026474 I 0.721
IRF9 Equus caballus ENSECAG00000024429 I 0.702
irf9 Danio rerio ENSDARG00000016457 I 0.827
IRF9 Canis familiaris ENSCAFG00000012007 I 0.712
IRF9 Homo sapiens ENSG00000213928 D 0.712
Irf9 Mus musculus ENSMUSG00000002325 D 0.731
IRF9 Otolemur garnettii ENSOGAG00000026670 I 0.731
IRF9 Myotis lucifugus ENSMLUG00000025255 I 0.721
IRF9 Ochotona princeps ENSOPRG00000018909 D 0.702
irf9 Oryzias latipes ENSORLG00000013335 I 0.904
IRF9 Loxodonta africana ENSLAFG00000026182 I 0.731
IRF9 Gorilla gorilla ENSGGOG00000016046 I 0.712
IRF9 Pan troglodytes ENSPTRG00000034494 I 0.712
IRF9 Pteropus vampyrus ENSPVAG00000007716 I 0.702
Irf9 Rattus norvegicus ENSRNOG00000019478 I 0.731
irf9 Gasterosteus aculeatus ENSGACG00000001697 I 0.894
IRF9 Sus scrofa ENSSSCG00000002002 D 0.702
irf9.L Xenopus laevis XB-GENE-992442 N 0.712
Myotis_brandtii_IRF9_10003711 Myotis brandtii Myotis_brandtii_IRF9_10003711 I 0.721
Ogr03980 Ophisaurus gracilis Ogr03980 I 0.702
Pvit_14926 Pogona vitticeps Pvit_14926 I 0.712
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.712
Tal_R007108 Tyto alba Tal_R007108 I 0.712