CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000006624
(
Oreochromis niloticus
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSONIG00000006624
T244272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irf9
M00173_2.00
Mus musculus
NNNRAAANN
NNTTTYNNN
PBM
Badis et al.(2009)
Isgf3g_2853
0.731
0.731
Irf9
M09240_2.00
Mus musculus
GAAABHGAAAYT
ARTTTCDVTTTC
Misc
Kulakovskiy et al.(2013)
IRF9_MOUSE.H11MO.0.C
0.731
0.731
IRF9
M02257_2.00
Ochotona princeps
DNYRAAAVND
HNBTTTYRNH
PBM
Weirauch et al.(2014)
pTH9337
0.702
0.702
IRF9
M02258_2.00
Sus scrofa
WNYGAAASY
RSTTTCRNW
PBM
Weirauch et al.(2014)
pTH9287
0.702
0.702
IRF8
M03335_2.00
Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_1
0.702
0.702
IRF8
M03336_2.00
Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_2
0.702
0.702
IRF8
M05541_2.00
Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX
0.702
0.702
IRF8
M05543_2.00
Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN
SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX
0.702
0.702
IRF8
M09236_2.00
Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B
0.702
0.702
Irf8
M09246_2.00
Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A
0.702
0.702
IRF8
M10890_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ICSBP_Q6
0.702
0.702
IRF8
M10891_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF8_Q6
0.702
0.702
IRF8
M05542_2.00
Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX
0.702
0.702
IRF8
M05544_2.00
Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000008369
IRF
11
115
RLRSWIVEQVSSGKYPGLVWDDEAKTMFRIPWKHAGKQDFRKDEDAAIFKAWAEFKGKLTDGGQDNPAAWKTRLRCALNKSPEFKEVMDRAQLDISEPYKVYRLV
ENSONIP00000008370
IRF
11
115
RLRSWIVEQVSSGKYPGLVWDDEAKTMFRIPWKHAGKQDFRKDEDAAIFKAWAEFKGKLTDGGQDNPAAWKTRLRCALNKSPEFKEVMDRAQLDISEPYKVYRLV
Links
Other
IRF
family TFs
Other
Oreochromis niloticus
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
irf9
Oryzias latipes
ENSORLG00000013335
I
0.904
irf9
Gasterosteus aculeatus
ENSGACG00000001697
I
0.894
ENSPFOG00000021810
Poecilia formosa
ENSPFOG00000021810
I
0.894
ENSXMAG00000004567
Xiphophorus maculatus
ENSXMAG00000004567
I
0.885
irf9
Takifugu rubripes
ENSTRUG00000017722
I
0.875
irf9
Tetraodon nigroviridis
ENSTNIG00000008698
I
0.865
ENSTNIG00000002469
Tetraodon nigroviridis
ENSTNIG00000002469
I
0.841
irf9
Danio rerio
ENSDARG00000016457
I
0.827
ENSLOCG00000001187
Lepisosteus oculatus
ENSLOCG00000001187
I
0.821
ENSGMOG00000002167
Gadus morhua
ENSGMOG00000002167
I
0.817
ENSAMXG00000004911
Astyanax mexicanus
ENSAMXG00000004911
I
0.779
ENSLACG00000004633
Latimeria chalumnae
ENSLACG00000004633
I
0.750
IRF9
Loxodonta africana
ENSLAFG00000026182
I
0.731
Irf9
Mus musculus
ENSMUSG00000002325
D
0.731
Irf9
Rattus norvegicus
ENSRNOG00000019478
I
0.731
IRF9
Otolemur garnettii
ENSOGAG00000026670
I
0.731
IRF9
Oryctolagus cuniculus
ENSOCUG00000028186
I
0.731
IRF9
Callithrix jacchus
ENSCJAG00000007065
I
0.731
IRF9
Myotis lucifugus
ENSMLUG00000025255
I
0.721
ENSCSAG00000016071
Chlorocebus sabaeus
ENSCSAG00000016071
I
0.721
ENSPPYG00000005686
Pongo abelii
ENSPPYG00000005686
I
0.721
Myotis_brandtii_IRF9_10003711
Myotis brandtii
Myotis_brandtii_IRF9_10003711
I
0.721
IRF9
Cavia porcellus
ENSCPOG00000026474
I
0.721
ENSTSYG00000007445
Tarsius syrichta
ENSTSYG00000007445
I
0.721
irf8.L
Xenopus laevis
XB-GENE-985949
I
0.721
Cmyd_10021085
Chelonia mydas
Cmyd_10021085
I
0.712
Brh_R009589
Buceros rhinoceros
Brh_R009589
I
0.712
ENSPSIG00000011788
Pelodiscus sinensis
ENSPSIG00000011788
I
0.712
Alligator_sinensis_CCG008430.1
Alligator sinensis
Alligator_sinensis_CCG008430.1
I
0.712
IRF9
Canis familiaris
ENSCAFG00000012007
I
0.712
ENSAMEG00000016347
Ailuropoda melanoleuca
ENSAMEG00000016347
I
0.712
ENSSTOG00000023450
Ictidomys tridecemlineatus
ENSSTOG00000023450
I
0.712
Afo_R011419
Aptenodytes forsteri
Afo_R011419
I
0.712
IRF8
Gallus gallus
ENSGALG00000005757
I
0.712
Alligator_sinensis_CCG003072.1
Alligator sinensis
Alligator_sinensis_CCG003072.1
I
0.712
IRF9
Pan troglodytes
ENSPTRG00000034494
I
0.712
ENSACAG00000003946
Anolis carolinensis
ENSACAG00000003946
I
0.712
Tal_R007108
Tyto alba
Tal_R007108
I
0.712
IRF9
Felis catus
ENSFCAG00000018849
I
0.712
IRF9
Homo sapiens
ENSG00000213928
D
0.712
irf9.L
Xenopus laevis
XB-GENE-992442
N
0.712
IRF9
Gorilla gorilla
ENSGGOG00000016046
I
0.712
Pvit_16863
Pogona vitticeps
Pvit_16863
I
0.712
ENSMMUG00000012474
Macaca mulatta
ENSMMUG00000012474
I
0.712
ENSFALG00000006647
Ficedula albicollis
ENSFALG00000006647
I
0.712
ENSMPUG00000008641
Mustela putorius furo
ENSMPUG00000008641
I
0.712
ENSP00000380073
Macaca fascicularis
ENSP00000380073
I
0.712
ENSNLEG00000015294
Nomascus leucogenys
ENSNLEG00000015294
I
0.712
Pvit_14926
Pogona vitticeps
Pvit_14926
I
0.712
IRF8
Anolis carolinensis
ENSACAG00000005409
I
0.702
Aan_R009222
Calypte anna
Aan_R009222
I
0.702
Ogr03980
Ophisaurus gracilis
Ogr03980
I
0.702
ENSP00000268638-D1
Bos grunniens
ENSP00000268638-D1
I
0.702
IRF9
Pteropus vampyrus
ENSPVAG00000007716
I
0.702
IRF8
Monodelphis domestica
ENSMODG00000004572
I
0.702
ENSMPUG00000005961
Mustela putorius furo
ENSMPUG00000005961
I
0.702
Irf8
Mus musculus
ENSMUSG00000041515
D
0.702
ENSMEUG00000010784
Macropus eugenii
ENSMEUG00000010784
I
0.702
ENSLOCG00000001013
Lepisosteus oculatus
ENSLOCG00000001013
I
0.702
irf8
Gasterosteus aculeatus
ENSGACG00000015958
I
0.702
IRF8
Homo sapiens
ENSG00000140968
D
0.702
ENSOARG00000011513
Ovis aries
ENSOARG00000011513
I
0.702
IRF9
Equus caballus
ENSECAG00000024429
I
0.702
ENSSHAG00000006901
Sarcophilus harrisii
ENSSHAG00000006901
I
0.702
IRF9
Sus scrofa
ENSSSCG00000002002
D
0.702
ENSSHAG00000001872
Sarcophilus harrisii
ENSSHAG00000001872
I
0.702
Irf8
Rattus norvegicus
ENSRNOG00000017869
I
0.702
IRF9
Ochotona princeps
ENSOPRG00000018909
D
0.702
ENSCPOG00000027266
Cavia porcellus
ENSCPOG00000027266
I
0.702
IRF8
Bos taurus
ENSBTAG00000017824
I
0.702