CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa024504mg
(
Prunus persica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
PRUPE_ppa024504mg
T245939_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ20980
LOB
5
103
RCAACKYLRRRCPSDCIFFPYFPPNNPERFASVHRIYGASNVAKMLQQLPHHLRGEAADTLCYEAECRTQDCVYGCVKTISQLHQEINKAECQLAKTRA
Links
Other
LOB
family TFs
Other
Prunus persica
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000288452
Malus domestica
MDP0000288452
N
0.838
POPTR_0012s13910
Populus trichocarpa
POPTR_0012s13910
I
0.788
Pm016263
Prunus mume
Pm016263
N
0.788
POPTR_0015s13870
Populus trichocarpa
POPTR_0015s13870
N
0.788
SapurV1A.0400s0200
Salix purpurea
SapurV1A.0400s0200
I
0.778
gene26806-v1.0-hybrid
Fragaria vesca
gene26806-v1.0-hybrid
N
0.768
SapurV1A.0068s0590
Salix purpurea
SapurV1A.0068s0590
N
0.758
evm.TU.supercontig_1.339
Carica papaya
evm.TU.supercontig_1.339
I
0.758
evm.TU.supercontig_1.335
Carica papaya
evm.TU.supercontig_1.335
I
0.747
cassava35977.valid.m1
Manihot esculenta
cassava35977.valid.m1
I
0.747
29613.m000372
Ricinus communis
29613.m000372
N
0.747
Cucsa.250990
Cucumis sativus
Cucsa.250990
N
0.747
cassava11118.m1
Manihot esculenta
cassava11118.m1
I
0.737
Cucsa.161230
Cucumis sativus
Cucsa.161230
N
0.737
TCM_035123
Theobroma cacao
TCM_035123
N
0.717
VIT_16s0100g00440
Vitis vinifera
VIT_16s0100g00440
N
0.707