TCM_035123 (Theobroma cacao)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 TCM_035123 T246138_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY16304 LOB 5 103

Links

Other LOB family TFs
Other Theobroma cacao TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.009G123600 Gossypium raimondii Gorai.009G123600 N 0.889
Gorai.008G280400 Gossypium raimondii Gorai.008G280400 N 0.859
POPTR_0012s13910 Populus trichocarpa POPTR_0012s13910 I 0.808
SapurV1A.0400s0200 Salix purpurea SapurV1A.0400s0200 I 0.798
evm.TU.supercontig_1.339 Carica papaya evm.TU.supercontig_1.339 I 0.788
29613.m000372 Ricinus communis 29613.m000372 N 0.788
POPTR_0015s13870 Populus trichocarpa POPTR_0015s13870 N 0.788
SapurV1A.0068s0590 Salix purpurea SapurV1A.0068s0590 N 0.778
evm.TU.supercontig_1.335 Carica papaya evm.TU.supercontig_1.335 I 0.778
cassava11118.m1 Manihot esculenta cassava11118.m1 I 0.768
Cucsa.250990 Cucumis sativus Cucsa.250990 N 0.768
VIT_16s0100g00440 Vitis vinifera VIT_16s0100g00440 N 0.758
Eucgr.A02814 Eucalyptus grandis Eucgr.A02814 I 0.747
gene26806-v1.0-hybrid Fragaria vesca gene26806-v1.0-hybrid N 0.747
Thhalv10005497m.g Eutrema salsugineum Thhalv10005497m.g I 0.727
Bostr.0556s0333 Boechera stricta Bostr.0556s0333 I 0.727
scaffold_500562.1 Arabidopsis lyrata scaffold_500562.1 I 0.727
Cucsa.161230 Cucumis sativus Cucsa.161230 N 0.727
cassava35977.valid.m1 Manihot esculenta cassava35977.valid.m1 I 0.727
Cagra.3598s0013 Capsella grandiflora Cagra.3598s0013 I 0.717
PRUPE_ppa024504mg Prunus persica PRUPE_ppa024504mg N 0.717
Bo00285s360 Brassica oleracea Bo00285s360 I 0.717
Pm016263 Prunus mume Pm016263 N 0.717
Carubv10018979m.g Capsella rubella Carubv10018979m.g I 0.717
MDP0000288452 Malus domestica MDP0000288452 N 0.714
Thhalv10015971m.g Eutrema salsugineum Thhalv10015971m.g I 0.707