Si004887m.g (Setaria italica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Si004887m.g T246039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si004887m LOB 4 91

Links

Other LOB family TFs
Other Setaria italica TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.950
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.938
OBART01G17510 Oryza barthii OBART01G17510 N 0.912
GRMZM2G073044 Zea mays GRMZM2G073044 N 0.912
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.912
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.912
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.912
OS01G0511000 Oryza sativa OS01G0511000 N 0.912
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.912
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.912
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.912
OB01G27020 Oryza brachyantha OB01G27020 N 0.912
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.912
Si022660m.g Setaria italica Si022660m.g N 0.863
Pavir.J00526 Panicum virgatum Pavir.J00526 N 0.863
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.850
Bo3g055690 Brassica oleracea Bo3g055690 N 0.850
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.850
Bra021433 Brassica rapa Bra021433 N 0.850
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N 0.838
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N 0.838
Traes_5BS_3EEBE3D51 Triticum aestivum Traes_5BS_3EEBE3D51 N 0.838
27524.m000293 Ricinus communis 27524.m000293 N 0.838
Traes_5BL_3EEBE3D51 Triticum aestivum Traes_5BL_3EEBE3D51 N 0.838
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.838
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N 0.838
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N 0.838
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.838
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.838
MLOC_58304 Hordeum vulgare MLOC_58304 N 0.838
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N 0.838
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N 0.838
PK04625.1 Cannabis sativa PK04625.1 N 0.837
TCM_019459 Theobroma cacao TCM_019459 N 0.825
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.825
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.825
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.825
LBD41 Arabidopsis thaliana AT3G02550 N 0.825
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N 0.825
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.825
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.825
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.825
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.825
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N 0.812
Traes_4DL_E0847FBC5 Triticum aestivum Traes_4DL_E0847FBC5 N 0.812
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.812
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.812
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.812
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N 0.812
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.812
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.812
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.812
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N 0.812
Cucsa.283560 Cucumis sativus Cucsa.283560 N 0.800
28207.m000107 Ricinus communis 28207.m000107 N 0.800
Cla020705 Citrullus lanatus Cla020705 N 0.800
mgf011656m Mimulus guttatus mgf011656m N 0.800
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.800
PK03169.1 Cannabis sativa PK03169.1 N 0.800
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.800
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.800
TCM_009888 Theobroma cacao TCM_009888 N 0.800
Si002412m.g Setaria italica Si002412m.g N 0.800
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.800
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.787
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N 0.787
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.787
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N 0.787
Traes_4BL_7F70575F9 Triticum aestivum Traes_4BL_7F70575F9 N 0.787
LBD42 Arabidopsis thaliana AT1G68510 N 0.787
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N 0.786
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N 0.778
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N 0.775
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.775
Carubv10002654m.g Capsella rubella Carubv10002654m.g N 0.775
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N 0.775
evm.TU.supercontig_1.42 Carica papaya evm.TU.supercontig_1.42 N 0.775
MDP0000233303 Malus domestica MDP0000233303 N 0.775
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.775
mgf017960m Mimulus guttatus mgf017960m N 0.775
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N 0.775
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.775
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.775
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.775
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N 0.765
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.762
Pm029059 Prunus mume Pm029059 N 0.762
Cucsa.199060 Cucumis sativus Cucsa.199060 N 0.762
Cla019264 Citrullus lanatus Cla019264 N 0.762
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.762
GRMZM2G386674 Zea mays GRMZM2G386674 N 0.755
Sb09g025710 Sorghum bicolor Sb09g025710 N 0.753
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.750
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N 0.750
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.750
Ca_05488 Cicer arietinum Ca_05488 N 0.750
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.750
PK25954.1 Cannabis sativa PK25954.1 N 0.739
TCM_012338 Theobroma cacao TCM_012338 N 0.738
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.738
Eucgr.B03016 Eucalyptus grandis Eucgr.B03016 N 0.738
VIT_01s0011g03530 Vitis vinifera VIT_01s0011g03530 N 0.738
MDP0000581845 Malus domestica MDP0000581845 N 0.738
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.738
GLYMA08G31143 Glycine max GLYMA08G31143 N 0.725
MTR_6g453130 Medicago truncatula MTR_6g453130 N 0.725
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.725
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.725
Sb09g030780 Sorghum bicolor Sb09g030780 N 0.724
Pavir.J01483 Panicum virgatum Pavir.J01483 N 0.714