Pavir.J04242 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.J04242 T247224_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J04242.1.p LOB 21 119

Links

Other LOB family TFs
Other Panicum virgatum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si015521m.g Setaria italica Si015521m.g N 0.980
Pavir.Cb01140 Panicum virgatum Pavir.Cb01140 N 0.970
Pavir.Fb01953 Panicum virgatum Pavir.Fb01953 N 0.929
Sb07g026800 Sorghum bicolor Sb07g026800 N 0.899
GRMZM2G132667 Zea mays GRMZM2G132667 N 0.889
OMERI02G02130 Oryza meridionalis OMERI02G02130 N 0.778
ORUFI08G22960 Oryza rufipogon ORUFI08G22960 N 0.778
OGLUM08G21760 Oryza glumaepatula OGLUM08G21760 N 0.778
ONIVA08G23410 Oryza nivara ONIVA08G23410 N 0.778
OBART08G20460 Oryza barthii OBART08G20460 N 0.778
BGIOSGA029005 Oryza indica BGIOSGA029005 N 0.778
OB08G27360 Oryza brachyantha OB08G27360 N 0.768
F775_04514 Aegilops tauschii F775_04514 N 0.768
TRIUR3_34186 Triticum urartu TRIUR3_34186 N 0.758
Traes_5BL_26B26165E Triticum aestivum Traes_5BL_26B26165E N 0.750
OPUNC08G18660 Oryza punctata OPUNC08G18660 N 0.747
LPERR08G17300 Leersia perrieri LPERR08G17300 N 0.747
LPERR03G31200 Leersia perrieri LPERR03G31200 N 0.737
OGLUM03G36620 Oryza glumaepatula OGLUM03G36620 N 0.737
BGIOSGA013705 Oryza indica BGIOSGA013705 N 0.737
OPUNC03G33890 Oryza punctata OPUNC03G33890 N 0.727
Sb01g005700 Sorghum bicolor Sb01g005700 N 0.727
Si039129m.g Setaria italica Si039129m.g N 0.727
Pavir.J05299 Panicum virgatum Pavir.J05299 N 0.717
Pavir.J09684 Panicum virgatum Pavir.J09684 N 0.707
GRMZM2G011385 Zea mays GRMZM2G011385 N 0.707