POPTR_0017s06810 (Populus trichocarpa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 POPTR_0017s06810 T255878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0017s06810.1 MADS box 21 68

Links

Other MADS box family TFs
Other Populus trichocarpa TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.979
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.979
SapurV1A.0150s0040 Salix purpurea SapurV1A.0150s0040 N 0.958
27866.m000233 Ricinus communis 27866.m000233 N 0.896
cassava27416.m1 Manihot esculenta cassava27416.m1 N 0.875
30099.m001672 Ricinus communis 30099.m001672 N 0.729
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.729
GRMZM2G110582 Zea mays GRMZM2G110582 N 0.723
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N 0.714
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.708
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.708
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.708
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.708
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.708
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.708
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.708
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.708
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.708
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.708
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.708
Cla006571 Citrullus lanatus Cla006571 N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.708
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.702
GRMZM2G035092 Zea mays GRMZM2G035092 N 0.702