27866.m000233 (Ricinus communis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 27866.m000233 T257130_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
27866.m000233 MADS box 21 68

Links

Other MADS box family TFs
Other Ricinus communis TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava27416.m1 Manihot esculenta cassava27416.m1 N 0.917
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.896
POPTR_0017s06810 Populus trichocarpa POPTR_0017s06810 N 0.896
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.896
SapurV1A.0150s0040 Salix purpurea SapurV1A.0150s0040 N 0.854
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.729
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.729
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.729
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.729
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.729
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.729
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.729
30099.m001672 Ricinus communis 30099.m001672 N 0.729
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.729
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.729
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.729
OPUNC06G14730 Oryza punctata OPUNC06G14730 N 0.729
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.729
OB01G24420 Oryza brachyantha OB01G24420 N 0.729
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.729
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.729
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.729
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.729
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.708
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.708
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.708
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.708
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.708
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.708
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.708
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.708
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
PGSC0003DMG400039595 Solanum tuberosum PGSC0003DMG400039595 N 0.708
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.708
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.708
POPTR_0004s00400 Populus trichocarpa POPTR_0004s00400 N 0.708
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.708
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.708
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.708
Bo9g142570 Brassica oleracea Bo9g142570 N 0.708
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.708
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.708
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.708
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.708
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.708
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.708
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.708
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Cla010744 Citrullus lanatus Cla010744 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.708
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.708
Cla006571 Citrullus lanatus Cla006571 N 0.708
Ca_04665 Cicer arietinum Ca_04665 N 0.708
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.708