Eucgr.I02506 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.I02506 T257991_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.I02506.1 MADS box 15 62

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.938
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.917
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.917
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.917
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.917
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.917
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.917
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.917
Ca_04660 Cicer arietinum Ca_04660 N 0.896
Ca_04665 Cicer arietinum Ca_04665 N 0.896
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.896
Ca_04659 Cicer arietinum Ca_04659 N 0.896
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.875
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.875
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.875
Pm021071 Prunus mume Pm021071 N 0.875
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.875
30099.m001672 Ricinus communis 30099.m001672 N 0.875
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.854
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.854
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.854
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.854
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.854
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.854
Cla006571 Citrullus lanatus Cla006571 N 0.854
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.854
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.854
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.854
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.854
MDP0000434703 Malus domestica MDP0000434703 I 0.854
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.854
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.854
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.854
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.854
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.854
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.854
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.854
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.854
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.854
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.854
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.854
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.854
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.854
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.854
Ca_04662 Cicer arietinum Ca_04662 N 0.854
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.854
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.854
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.854
AGL62 Arabidopsis thaliana AT5G60440 I 0.854
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.854
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.833
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.833
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.833
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.833
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.833
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.833
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.833
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.833
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.833
Ca_04661 Cicer arietinum Ca_04661 N 0.833
Bo9g142570 Brassica oleracea Bo9g142570 N 0.833
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.833
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.833
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.833
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.833
MDP0000233925 Malus domestica MDP0000233925 N 0.833
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.833
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.833
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.833
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.833
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.833
MDP0000278770 Malus domestica MDP0000278770 N 0.833
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.833
Bra002480 Brassica rapa Bra002480 N 0.833
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.833
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.833
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.833
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.833
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.833
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.833
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.833
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.833
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.833
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.833
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.833
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.812
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.812
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.812
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.812
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.812
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.812
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.812
Bo1g112460 Brassica oleracea Bo1g112460 N 0.812
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.812
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.812
Pm021017 Prunus mume Pm021017 N 0.812
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.812
TCM_006323 Theobroma cacao TCM_006323 N 0.812
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.812
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.812
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.812
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.812
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.812
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.812
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.812
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.812
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.812
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.812
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.812
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.812
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.812
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.795
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.792
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.792
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.792
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.792
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.792
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.792
AGL28 Arabidopsis thaliana AT1G01530 N 0.792
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.792
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.792
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.792
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.792
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.792
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.792
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.792
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.792
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.792
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.792
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.792
Bo5g113750 Brassica oleracea Bo5g113750 N 0.792
Pm021018 Prunus mume Pm021018 N 0.792
Bra038225 Brassica rapa Bra038225 N 0.792
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.792
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.792
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.771
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.771
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.771
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.771
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.771
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.771
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.771
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.771
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.771
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.771
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.771
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.771
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.771
MDP0000221590 Malus domestica MDP0000221590 N 0.771
Bra022434 Brassica rapa Bra022434 N 0.771
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.771
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.771
mgf022790m Mimulus guttatus mgf022790m N 0.771
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.771
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.771
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.763
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.750
Pm021070 Prunus mume Pm021070 N 0.750
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.750
TCM_040735 Theobroma cacao TCM_040735 N 0.750
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.750
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.750
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.750
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.750
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.750
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.750
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.750
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.750
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.750
Thhalv10003315m.g Eutrema salsugineum Thhalv10003315m.g N 0.750
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.750
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.750
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.750
gene00615-v1.0-hybrid Fragaria vesca gene00615-v1.0-hybrid N 0.729
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.729
evm.TU.supercontig_348.1 Carica papaya evm.TU.supercontig_348.1 N 0.729
evm.TU.supercontig_347.14 Carica papaya evm.TU.supercontig_347.14 N 0.729
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
Ca_26354 Cicer arietinum Ca_26354 N 0.729
Ca_07607 Cicer arietinum Ca_07607 N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
29613.m000367 Ricinus communis 29613.m000367 N 0.729
GLYMA10G10920 Glycine max GLYMA10G10920 N 0.729
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.729
GLYMA10G10690 Glycine max GLYMA10G10690 N 0.729
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.729
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.729
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.729
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.729
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.729
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.729
29838.m001672 Ricinus communis 29838.m001672 N 0.729
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.729
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.729
evm.TU.contig_37718 Carica papaya evm.TU.contig_37718 N 0.729
evm.TU.contig_37906 Carica papaya evm.TU.contig_37906 N 0.729
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
MDP0000168914 Malus domestica MDP0000168914 N 0.729
AGL23 Arabidopsis thaliana AT1G65360 N 0.729
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.729
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.729
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.729
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.729
evm.TU.contig_41453 Carica papaya evm.TU.contig_41453 N 0.717
evm.TU.supercontig_695.6 Carica papaya evm.TU.supercontig_695.6 N 0.711
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.708
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
chr4.CM0100.30.nc Lotus japonicus chr4.CM0100.30.nc I 0.708
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.708
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.708
evm.TU.contig_30005.2 Carica papaya evm.TU.contig_30005.2 N 0.708
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.708
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.708
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.708
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.708
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.708
27866.m000233 Ricinus communis 27866.m000233 N 0.708
GLYMA07G30040 Glycine max GLYMA07G30040 I 0.708
GLYMA08G07260 Glycine max GLYMA08G07260 I 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
PGSC0003DMG400046733 Solanum tuberosum PGSC0003DMG400046733 N 0.708
MTR_3g067910 Medicago truncatula MTR_3g067910 N 0.708
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I 0.708
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I 0.708
PGSC0003DMG400039595 Solanum tuberosum PGSC0003DMG400039595 N 0.708
PGSC0003DMG400039835 Solanum tuberosum PGSC0003DMG400039835 N 0.708
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.708
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.708
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.708
Bra030228 Brassica rapa Bra030228 I 0.708
evm.TU.contig_37107 Carica papaya evm.TU.contig_37107 N 0.708
Bra011938 Brassica rapa Bra011938 N 0.708
evm.TU.contig_35554.1 Carica papaya evm.TU.contig_35554.1 N 0.708
evm.TU.contig_38802 Carica papaya evm.TU.contig_38802 N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
evm.TU.supercontig_348.10 Carica papaya evm.TU.supercontig_348.10 N 0.708
Bo4g149800 Brassica oleracea Bo4g149800 I 0.708
evm.TU.contig_31965.1 Carica papaya evm.TU.contig_31965.1 N 0.708
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
Bra026764 Brassica rapa Bra026764 N 0.708
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Bra020247 Brassica rapa Bra020247 N 0.708
PGSC0003DMG400036190 Solanum tuberosum PGSC0003DMG400036190 N 0.702
Bo4g070340 Brassica oleracea Bo4g070340 N 0.702
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.700