MTR_5g053390 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_5g053390 T254802_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES97375 MADS box 17 64

Links

Other MADS box family TFs
Other Medicago truncatula TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.938
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.938
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.938
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.917
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.917
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.896
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.896
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.896
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.896
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.875
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.875
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.875
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.875
Ca_04660 Cicer arietinum Ca_04660 N 0.875
Ca_04665 Cicer arietinum Ca_04665 N 0.875
Ca_04659 Cicer arietinum Ca_04659 N 0.875
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.875
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.875
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.854
Ca_04662 Cicer arietinum Ca_04662 N 0.854
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.854
Ca_04661 Cicer arietinum Ca_04661 N 0.854
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.833
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.833
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.833
Pm021071 Prunus mume Pm021071 N 0.833
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.833
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.833
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.833
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.833
Cla006571 Citrullus lanatus Cla006571 N 0.812
AGL62 Arabidopsis thaliana AT5G60440 I 0.812
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.812
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.812
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.812
MDP0000434703 Malus domestica MDP0000434703 I 0.812
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.812
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.812
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.812
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.812
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.812
30099.m001672 Ricinus communis 30099.m001672 N 0.792
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.792
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.792
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.792
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.792
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.792
MDP0000278770 Malus domestica MDP0000278770 N 0.792
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.792
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.792
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.792
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.792
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.792
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.792
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.792
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.792
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.792
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.792
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.792
MDP0000233925 Malus domestica MDP0000233925 N 0.792
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.792
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.792
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.789
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.773
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.771
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.771
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.771
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.771
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.771
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.771
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.771
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.771
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.771
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.771
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.771
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.771
Bo1g112460 Brassica oleracea Bo1g112460 N 0.771
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.771
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.771
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.771
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.771
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.771
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.771
TCM_006323 Theobroma cacao TCM_006323 N 0.771
MDP0000221590 Malus domestica MDP0000221590 N 0.771
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.771
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.771
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.771
Pm021018 Prunus mume Pm021018 N 0.771
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.771
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.750
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.750
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.750
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.750
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.750
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.750
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.750
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.750
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.750
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.750
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.750
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.750
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.750
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.750
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.750
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
AGL28 Arabidopsis thaliana AT1G01530 N 0.750
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.750
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.750
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.750
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.750
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.750
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.750
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.750
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.750
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.750
Bra002480 Brassica rapa Bra002480 N 0.750
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.750
Bra038225 Brassica rapa Bra038225 N 0.750
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.750
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.750
Bo9g142570 Brassica oleracea Bo9g142570 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.750
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.750
MTR_3g067910 Medicago truncatula MTR_3g067910 N 0.729
MTR_3g067870 Medicago truncatula MTR_3g067870 N 0.729
Bra022434 Brassica rapa Bra022434 N 0.729
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.729
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.729
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.729
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.729
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.729
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.729
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.729
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.729
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.729
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.729
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.708
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.708
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.708
TCM_040735 Theobroma cacao TCM_040735 N 0.708
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.708
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.708
AGL23 Arabidopsis thaliana AT1G65360 N 0.708
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.708
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.708
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.708
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.708
Pm021070 Prunus mume Pm021070 N 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.708
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.708
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.708
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.708
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.708
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.708
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.708
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.700