Bostr.5325s0071 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.5325s0071 T257637_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.5325s0071.1.p MADS box 15 62

Links

Other MADS box family TFs
Other Boechera stricta TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.938
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.896
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.896
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.896
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.896
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.896
AGL28 Arabidopsis thaliana AT1G01530 N 0.896
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.875
Cla006571 Citrullus lanatus Cla006571 N 0.875
Ca_04661 Cicer arietinum Ca_04661 N 0.875
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.875
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.875
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.875
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.875
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.875
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.875
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.875
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.875
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.875
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.868
MDP0000221590 Malus domestica MDP0000221590 N 0.854
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.854
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.854
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.854
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.854
Ca_04665 Cicer arietinum Ca_04665 N 0.854
30099.m001672 Ricinus communis 30099.m001672 N 0.854
Bo1g112460 Brassica oleracea Bo1g112460 N 0.854
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.854
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.854
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.854
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.854
Pm021071 Prunus mume Pm021071 N 0.854
Ca_04659 Cicer arietinum Ca_04659 N 0.854
Ca_04660 Cicer arietinum Ca_04660 N 0.854
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.854
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.833
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.833
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.833
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.833
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.833
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.833
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.833
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.833
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.833
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.833
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.833
TCM_006323 Theobroma cacao TCM_006323 N 0.833
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.833
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.833
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.833
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.833
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.833
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.833
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.833
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.833
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.833
Bo5g113750 Brassica oleracea Bo5g113750 N 0.833
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.833
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.833
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.833
Bra038225 Brassica rapa Bra038225 N 0.833
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.833
MDP0000434703 Malus domestica MDP0000434703 I 0.833
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.833
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.833
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.833
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.833
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.833
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.833
AGL23 Arabidopsis thaliana AT1G65360 N 0.833
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.833
AGL62 Arabidopsis thaliana AT5G60440 I 0.833
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.812
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.812
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.812
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.812
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.812
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.812
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.812
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.812
Bra002480 Brassica rapa Bra002480 N 0.812
Bo9g142570 Brassica oleracea Bo9g142570 N 0.812
Bo2g024910 Brassica oleracea Bo2g024910 N 0.812
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.812
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.812
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.812
Pm021018 Prunus mume Pm021018 N 0.812
Ca_04662 Cicer arietinum Ca_04662 N 0.812
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.812
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.812
Bra022434 Brassica rapa Bra022434 N 0.812
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.812
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.812
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.812
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.812
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.812
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.812
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.812
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.812
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.812
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.812
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.812
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.812
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.812
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.812
MDP0000233925 Malus domestica MDP0000233925 N 0.812
MDP0000278770 Malus domestica MDP0000278770 N 0.812
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.812
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.812
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.812
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.812
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.812
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.792
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.792
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.792
mgf024307m Mimulus guttatus mgf024307m N 0.792
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.792
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.792
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.792
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.792
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.792
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.792
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.792
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.792
mgf018529m Mimulus guttatus mgf018529m N 0.792
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.792
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.792
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.792
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.792
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.792
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.792
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.792
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.792
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.792
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.792
Bra020247 Brassica rapa Bra020247 N 0.792
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.771
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.771
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.771
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.771
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.771
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.771
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.771
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.771
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.771
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.771
MDP0000168914 Malus domestica MDP0000168914 N 0.771
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.771
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.771
Pm021070 Prunus mume Pm021070 N 0.771
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.771
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.771
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.771
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.771
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.771
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.771
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.771
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.750
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.750
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.750
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.750
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.750
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.750
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.750
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.750
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.750
Bra011938 Brassica rapa Bra011938 N 0.750
LjSGA_020620.1 Lotus japonicus LjSGA_020620.1 N 0.750
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.750
Pm021017 Prunus mume Pm021017 N 0.750
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.750
29613.m000367 Ricinus communis 29613.m000367 N 0.750
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.750
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.750
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.750
TCM_040735 Theobroma cacao TCM_040735 N 0.750
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.750
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.750
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.750
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.750
Bo4g070340 Brassica oleracea Bo4g070340 N 0.745
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.729
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.729
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.729
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.729
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.729
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.729
Ca_07607 Cicer arietinum Ca_07607 N 0.729
Ca_26354 Cicer arietinum Ca_26354 N 0.729
Gorai.008G017200 Gossypium raimondii Gorai.008G017200 I 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
mgf022790m Mimulus guttatus mgf022790m N 0.729
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.729
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.729
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.729
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.729
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.729
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.729
AGL61 Arabidopsis thaliana AT2G24840 N 0.729
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.729
Cucsa.331840 Cucumis sativus Cucsa.331840 I 0.729
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.729
PGSC0003DMG400044513 Solanum tuberosum PGSC0003DMG400044513 N 0.729
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.729
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.729
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.729
Bo2g024870 Brassica oleracea Bo2g024870 N 0.729
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.729
VIT_03s0017g00360 Vitis vinifera VIT_03s0017g00360 I 0.729
VIT_00s0729g00010 Vitis vinifera VIT_00s0729g00010 I 0.729
evm.TU.contig_41453 Carica papaya evm.TU.contig_41453 N 0.717
GLYMA11G03261 Glycine max GLYMA11G03261 N 0.717
Bra007829 Brassica rapa Bra007829 N 0.708
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.708
SapurV1A.0187s0010 Salix purpurea SapurV1A.0187s0010 I 0.708
Bo4g165540 Brassica oleracea Bo4g165540 N 0.708
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.708
Bra020242 Brassica rapa Bra020242 N 0.708
LjSGA_074894.2 Lotus japonicus LjSGA_074894.2 N 0.708
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
PGSC0003DMG400040625 Solanum tuberosum PGSC0003DMG400040625 N 0.708
VIT_15s0024g02000 Vitis vinifera VIT_15s0024g02000 I 0.708
VIT_15s0107g00120 Vitis vinifera VIT_15s0107g00120 I 0.708
VIT_03s0167g00100 Vitis vinifera VIT_03s0167g00100 I 0.708
VIT_03s0017g00450 Vitis vinifera VIT_03s0017g00450 I 0.708
TCM_007378 Theobroma cacao TCM_007378 I 0.708
VIT_02s0025g04650 Vitis vinifera VIT_02s0025g04650 I 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
Pm016629 Prunus mume Pm016629 N 0.708
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
mgf022147m Mimulus guttatus mgf022147m N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.708
Pm022002 Prunus mume Pm022002 I 0.708
30099.m001671 Ricinus communis 30099.m001671 N 0.708
Solyc04g047870.1 Solanum lycopersicum Solyc04g047870.1 N 0.708
Solyc04g025050.1 Solanum lycopersicum Solyc04g025050.1 N 0.708
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.708
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.708
Gorai.005G225500 Gossypium raimondii Gorai.005G225500 I 0.708
Gorai.013G055700 Gossypium raimondii Gorai.013G055700 I 0.708
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.708
GLYMA15G06302 Glycine max GLYMA15G06302 I 0.708
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.708
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.708
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
POPTR_0007s03290 Populus trichocarpa POPTR_0007s03290 I 0.708
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
POPTR_0007s03270 Populus trichocarpa POPTR_0007s03270 I 0.708
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.700