CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo2g024870
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo2g024870
T253066_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo2g024870.1
MADS box
14
61
KIEKENNLQVTFSKRKDGLFKKANELCTLCDARVAIILFSPSGKMYSF
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra020242
Brassica rapa
Bra020242
N
0.875
Bo2g024900
Brassica oleracea
Bo2g024900
N
0.875
Bra020247
Brassica rapa
Bra020247
N
0.833
Bo2g024910
Brassica oleracea
Bo2g024910
N
0.792
Al_scaffold_0001_74
Arabidopsis lyrata
Al_scaffold_0001_74
N
0.771
scaffold_302326.1
Arabidopsis lyrata
scaffold_302326.1
I
0.750
VIT_03s0088g00590
Vitis vinifera
VIT_03s0088g00590
N
0.750
VIT_03s0088g00510
Vitis vinifera
VIT_03s0088g00510
N
0.750
Cagra.1968s0094
Capsella grandiflora
Cagra.1968s0094
N
0.750
AGL28
Arabidopsis thaliana
AT1G01530
N
0.750
TCM_040735
Theobroma cacao
TCM_040735
N
0.750
Carubv10010156m.g
Capsella rubella
Carubv10010156m.g
N
0.750
Thhalv10012100m.g
Eutrema salsugineum
Thhalv10012100m.g
I
0.737
VIT_03s0088g00600
Vitis vinifera
VIT_03s0088g00600
N
0.729
Bostr.5325s0071
Boechera stricta
Bostr.5325s0071
N
0.729
VIT_03s0088g00610
Vitis vinifera
VIT_03s0088g00610
N
0.729
VIT_01s0010g01530
Vitis vinifera
VIT_01s0010g01530
N
0.729
gene01788-v1.0-hybrid
Fragaria vesca
gene01788-v1.0-hybrid
I
0.729
Al_scaffold_0002_1221
Arabidopsis lyrata
Al_scaffold_0002_1221
N
0.729
Gorai.006G127800
Gossypium raimondii
Gorai.006G127800
N
0.729
AGL23
Arabidopsis thaliana
AT1G65360
N
0.729
mgf024307m
Mimulus guttatus
mgf024307m
N
0.708
Thhalv10015908m.g
Eutrema salsugineum
Thhalv10015908m.g
N
0.708
MDP0000168914
Malus domestica
MDP0000168914
N
0.708
mgf018529m
Mimulus guttatus
mgf018529m
N
0.708
VIT_01s0010g01500
Vitis vinifera
VIT_01s0010g01500
N
0.708
PGSC0003DMG400043633
Solanum tuberosum
PGSC0003DMG400043633
N
0.708
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
0.708
MTR_1g108580
Medicago truncatula
MTR_1g108580
N
0.708
Bra002480
Brassica rapa
Bra002480
N
0.708
PRUPE_ppa017246mg
Prunus persica
PRUPE_ppa017246mg
N
0.708
PRUPE_ppa026127mg
Prunus persica
PRUPE_ppa026127mg
N
0.708
Pm021070
Prunus mume
Pm021070
N
0.708
Ca_04661
Cicer arietinum
Ca_04661
N
0.708
TCM_006324
Theobroma cacao
TCM_006324
N
0.708
Pm021071
Prunus mume
Pm021071
N
0.708