MTR_2g093190 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_2g093190 T254737_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES67398 MADS box 17 64

Links

Other MADS box family TFs
Other Medicago truncatula TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.958
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.958
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.896
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.896
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.896
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.896
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.896
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.875
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.875
Ca_04665 Cicer arietinum Ca_04665 N 0.875
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.875
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.854
Ca_04662 Cicer arietinum Ca_04662 N 0.854
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.854
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.854
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.854
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.854
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.854
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.854
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.854
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.854
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.854
AGL62 Arabidopsis thaliana AT5G60440 I 0.833
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.833
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.833
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.833
Ca_04660 Cicer arietinum Ca_04660 N 0.833
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.833
Ca_04659 Cicer arietinum Ca_04659 N 0.833
Bra002480 Brassica rapa Bra002480 N 0.833
Bo9g142570 Brassica oleracea Bo9g142570 N 0.833
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.833
Ca_04661 Cicer arietinum Ca_04661 N 0.833
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.833
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.812
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.812
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.812
Cla006571 Citrullus lanatus Cla006571 N 0.812
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.812
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.812
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.812
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.812
Pm021071 Prunus mume Pm021071 N 0.812
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.812
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.812
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.812
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.812
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.812
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.795
MDP0000434703 Malus domestica MDP0000434703 I 0.792
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.792
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.792
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.792
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.792
Pm021018 Prunus mume Pm021018 N 0.792
30099.m001672 Ricinus communis 30099.m001672 N 0.792
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.792
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.792
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.792
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.792
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.792
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.792
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.792
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.792
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.792
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.792
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.792
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.792
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.771
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.771
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.771
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.771
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.771
AGL28 Arabidopsis thaliana AT1G01530 N 0.771
mgf022790m Mimulus guttatus mgf022790m N 0.771
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.771
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.771
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.771
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.771
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.771
Bo1g112460 Brassica oleracea Bo1g112460 N 0.771
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.771
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.771
TCM_006323 Theobroma cacao TCM_006323 N 0.771
MDP0000278770 Malus domestica MDP0000278770 N 0.771
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.771
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.771
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.771
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.771
MDP0000233925 Malus domestica MDP0000233925 N 0.771
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.771
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.771
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.771
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.771
MDP0000221590 Malus domestica MDP0000221590 N 0.771
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.771
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.771
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.763
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.756
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.750
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.750
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.750
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.750
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.750
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.750
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.750
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.750
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.750
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.750
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.750
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.750
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.750
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.750
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.750
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.750
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.750
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.750
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.750
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.750
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.750
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.750
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.750
Bra038225 Brassica rapa Bra038225 N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
Ca_07607 Cicer arietinum Ca_07607 N 0.750
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.750
mgf024307m Mimulus guttatus mgf024307m N 0.750
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.750
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.750
mgf018529m Mimulus guttatus mgf018529m N 0.750
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.750
29613.m000367 Ricinus communis 29613.m000367 N 0.750
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.750
Ca_26354 Cicer arietinum Ca_26354 N 0.750
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.729
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.729
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.729
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.729
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.729
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.729
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.729
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.729
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
mgf022147m Mimulus guttatus mgf022147m N 0.729
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.729
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.729
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.729
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.729
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.729
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.729
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.729
TCM_040735 Theobroma cacao TCM_040735 N 0.729
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.729
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.729
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.729
AGL23 Arabidopsis thaliana AT1G65360 N 0.729
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.729
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.729
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.729
Bra022434 Brassica rapa Bra022434 N 0.729
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.729
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.708
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.708
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.708
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.708
BRADI1G27900 Brachypodium distachyon BRADI1G27900 N 0.708
Bra020247 Brassica rapa Bra020247 N 0.708
Bo2g024910 Brassica oleracea Bo2g024910 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.708
PGSC0003DMG400044513 Solanum tuberosum PGSC0003DMG400044513 N 0.708
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.708
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.708
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.708
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.708
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.708
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.708
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.708
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.708
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Pm021070 Prunus mume Pm021070 N 0.708
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.708
30099.m001671 Ricinus communis 30099.m001671 N 0.708
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.708
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.707
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.700