GLYMA10G40060 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA10G40060 T254175_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G40060.2 MADS box 18 65

Links

Other MADS box family TFs
Other Glycine max TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_26354 Cicer arietinum Ca_26354 N 0.958
Ca_07607 Cicer arietinum Ca_07607 N 0.958
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.958
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.958
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.938
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.938
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.917
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.875
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.875
29613.m000367 Ricinus communis 29613.m000367 N 0.875
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.854
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.854
30099.m001671 Ricinus communis 30099.m001671 N 0.854
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.833
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.833
mgf018529m Mimulus guttatus mgf018529m N 0.833
mgf024307m Mimulus guttatus mgf024307m N 0.833
Pm021070 Prunus mume Pm021070 N 0.833
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.833
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.833
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.833
MDP0000168914 Malus domestica MDP0000168914 N 0.833
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.812
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.812
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.812
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.812
Pm016629 Prunus mume Pm016629 N 0.812
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.812
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.812
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.812
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.812
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.812
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.812
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.792
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.792
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.792
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.792
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.792
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.792
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.792
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.792
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.792
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.792
30099.m001672 Ricinus communis 30099.m001672 N 0.771
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.771
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.771
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.771
Cla006571 Citrullus lanatus Cla006571 N 0.771
TCM_040735 Theobroma cacao TCM_040735 N 0.771
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.771
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.771
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.771
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.771
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.771
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.771
Bra026764 Brassica rapa Bra026764 N 0.771
AGL61 Arabidopsis thaliana AT2G24840 N 0.771
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.771
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.771
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.771
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.750
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
Ca_04665 Cicer arietinum Ca_04665 N 0.750
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.750
Bo9g142570 Brassica oleracea Bo9g142570 N 0.750
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.750
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.750
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.750
Pm021018 Prunus mume Pm021018 N 0.750
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.750
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.750
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.750
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.750
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.750
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.750
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.750
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.750
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.750
AGL62 Arabidopsis thaliana AT5G60440 I 0.750
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.750
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.750
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.729
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.729
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.729
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.729
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.729
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.729
MDP0000221590 Malus domestica MDP0000221590 N 0.729
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.729
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.729
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.729
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.729
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.729
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.729
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.729
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.729
mgf021403m Mimulus guttatus mgf021403m N 0.729
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.729
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.729
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.729
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.729
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.729
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.729
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.729
TCM_006324 Theobroma cacao TCM_006324 N 0.729
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.729
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.729
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.729
Bra002480 Brassica rapa Bra002480 N 0.729
Bo8g099550 Brassica oleracea Bo8g099550 N 0.729
Bo4g165540 Brassica oleracea Bo4g165540 N 0.729
Bo1g112460 Brassica oleracea Bo1g112460 N 0.729
Bra007829 Brassica rapa Bra007829 N 0.729
Bra022434 Brassica rapa Bra022434 N 0.729
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.729
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.729
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.729
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.729
TCM_006323 Theobroma cacao TCM_006323 N 0.729
Pm021071 Prunus mume Pm021071 N 0.729
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.729
Ca_04662 Cicer arietinum Ca_04662 N 0.729
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.729
mgf017842m Mimulus guttatus mgf017842m N 0.729
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.727
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
mgf020533m Mimulus guttatus mgf020533m N 0.708
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.708
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.708
MDP0000434703 Malus domestica MDP0000434703 I 0.708
Ca_04661 Cicer arietinum Ca_04661 N 0.708
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.708
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.708
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.708
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.708
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.708
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.708
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.708
Bo5g113750 Brassica oleracea Bo5g113750 N 0.708
mgf023207m Mimulus guttatus mgf023207m N 0.708
AGL28 Arabidopsis thaliana AT1G01530 N 0.708
mgf024490m Mimulus guttatus mgf024490m N 0.708
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.708
mgf022790m Mimulus guttatus mgf022790m N 0.708
Bra038225 Brassica rapa Bra038225 N 0.708
F775_04223 Aegilops tauschii F775_04223 I 0.708
Bra032057 Brassica rapa Bra032057 N 0.708
mgf022403m Mimulus guttatus mgf022403m N 0.708
Thhalv10028255m.g Eutrema salsugineum Thhalv10028255m.g N 0.708
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.708
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.708
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.708
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.708
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.708
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.708
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.708
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.708
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.708
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.708
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.708
VIT_07s0005g06590 Vitis vinifera VIT_07s0005g06590 N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.708
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.708
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.708
VIT_10s0003g03970 Vitis vinifera VIT_10s0003g03970 N 0.708
Ca_04659 Cicer arietinum Ca_04659 N 0.708
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.708
Ca_04660 Cicer arietinum Ca_04660 N 0.708
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.708
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.708
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.708
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.708
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.708
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.708
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.708
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.708
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.708
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.708
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.708
TCM_000878 Theobroma cacao TCM_000878 N 0.708
mgf025566m Mimulus guttatus mgf025566m N 0.708
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.708