Solyc01g060300.1 (Solanum lycopersicum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Solyc01g060300.1 T256290_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g060300.1.1 MADS box 14 60

Links

Other MADS box family TFs
Other Solanum lycopersicum TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.957
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.957
PGSC0003DMG400041956 Solanum tuberosum PGSC0003DMG400041956 N 0.851
PGSC0003DMG400046706 Solanum tuberosum PGSC0003DMG400046706 N 0.830
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.766
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.766
mgf022147m Mimulus guttatus mgf022147m N 0.745
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.745
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.745
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.723
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.723
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.723
PGSC0003DMG400046733 Solanum tuberosum PGSC0003DMG400046733 N 0.723
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.723
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.723
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.723
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.723
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.723
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.723
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.723
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.723
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.723
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.723
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.723
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.723
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.723
Bra002480 Brassica rapa Bra002480 N 0.723
AGL62 Arabidopsis thaliana AT5G60440 I 0.723
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.723
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.723
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.723
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.723
PGSC0003DMG400039835 Solanum tuberosum PGSC0003DMG400039835 N 0.723
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.723
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.723
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.723
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.723
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.723
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
27866.m000233 Ricinus communis 27866.m000233 N 0.708
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.708
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.702
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.702
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.702
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.702
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.702
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.702
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.702
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.702
SapurV1A.0150s0040 Salix purpurea SapurV1A.0150s0040 N 0.702
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.702
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.702
Bo9g142570 Brassica oleracea Bo9g142570 N 0.702
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.702
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.702
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.702
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.702
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.702
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.702
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.702
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.702
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.702
Ca_04665 Cicer arietinum Ca_04665 N 0.702
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.702
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.702
Pm021071 Prunus mume Pm021071 N 0.702
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.702
TCM_006323 Theobroma cacao TCM_006323 N 0.702
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.702
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.702
PGSC0003DMG400038207 Solanum tuberosum PGSC0003DMG400038207 I 0.702
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.702
POPTR_0017s06810 Populus trichocarpa POPTR_0017s06810 N 0.702
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.702
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.702
30099.m001672 Ricinus communis 30099.m001672 N 0.702