Carubv10019521m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10019521m.g T257789_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019521m MADS box 23 71

Links

Other MADS box family TFs
Other Capsella rubella TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_501175.1 Arabidopsis lyrata scaffold_501175.1 N 0.911
Thhalv10015516m.g Eutrema salsugineum Thhalv10015516m.g N 0.891
Carubv10001421m.g Capsella rubella Carubv10001421m.g N 0.875
Cagra.6165s0001 Capsella grandiflora Cagra.6165s0001 N 0.875
AT1G48150 Arabidopsis thaliana AT1G48150 N 0.872
Bostr.0556s0683 Boechera stricta Bostr.0556s0683 N 0.870
Bostr.29827s0025 Boechera stricta Bostr.29827s0025 N 0.848
AGL39 Arabidopsis thaliana AT5G27130 N 0.826