AGL39 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT5G27130 T252914_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G27130.1 MADS box 13 71

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10001421m.g Capsella rubella Carubv10001421m.g N 0.917
Cagra.6165s0001 Capsella grandiflora Cagra.6165s0001 N 0.917
Bostr.29827s0025 Boechera stricta Bostr.29827s0025 N 0.896
Thhalv10015516m.g Eutrema salsugineum Thhalv10015516m.g N 0.854
scaffold_501175.1 Arabidopsis lyrata scaffold_501175.1 N 0.844
AT1G48150 Arabidopsis thaliana AT1G48150 N 0.830
Carubv10019521m.g Capsella rubella Carubv10019521m.g N 0.826
Bostr.0556s0683 Boechera stricta Bostr.0556s0683 N 0.771
Bra020600 Brassica rapa Bra020600 N 0.723
Bo2g155050 Brassica oleracea Bo2g155050 N 0.702