scaffold_501175.1 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 scaffold_501175.1 T256120_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_501175.1 MADS box 32 79

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G48150 Arabidopsis thaliana AT1G48150 N 0.956
Thhalv10015516m.g Eutrema salsugineum Thhalv10015516m.g N 0.933
Carubv10019521m.g Capsella rubella Carubv10019521m.g N 0.911
Bostr.29827s0025 Boechera stricta Bostr.29827s0025 N 0.844
Bostr.0556s0683 Boechera stricta Bostr.0556s0683 N 0.844
AGL39 Arabidopsis thaliana AT5G27130 N 0.844
Carubv10001421m.g Capsella rubella Carubv10001421m.g N 0.833
Cagra.6165s0001 Capsella grandiflora Cagra.6165s0001 N 0.833
Bo2g155050 Brassica oleracea Bo2g155050 N 0.711
Bra020600 Brassica rapa Bra020600 N 0.711