Lus10008176.g (Linum usitatissimum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Lus10008176.g T261535_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10008176 MBD 97 170

Links

Other MBD family TFs
Other Linum usitatissimum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10027980.g Linum usitatissimum Lus10027980.g N 0.986
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N 0.851
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N 0.851
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N 0.851
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N 0.824
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N 0.824
29703.m001533 Ricinus communis 29703.m001533 N 0.824
Lus10029631.g Linum usitatissimum Lus10029631.g N 0.824
Lus10042674.g Linum usitatissimum Lus10042674.g N 0.811
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N 0.797
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.784
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N 0.770
MBD4 Arabidopsis lyrata scaffold_503585.1 N 0.770
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.757
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.757
MBD1 Arabidopsis thaliana AT4G22745 N 0.757
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N 0.757
SapurV1A.0633s0300 Salix purpurea SapurV1A.0633s0300 N 0.743
MBD4 Arabidopsis thaliana AT3G63030 N 0.743
MBD1 Arabidopsis lyrata scaffold_702078.1 N 0.743
SapurV1A.0633s0290 Salix purpurea SapurV1A.0633s0290 N 0.743
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N 0.726
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N 0.726
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N 0.716
SapurV1A.0135s0370 Salix purpurea SapurV1A.0135s0370 N 0.716
Bo8g098350 Brassica oleracea Bo8g098350 N 0.703
Bra007723 Brassica rapa Bra007723 N 0.703