CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AT5G23650
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT5G23650
T266541_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G23650.1
Myb
10
58
GSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNIL
AT5G23650.1
Myb
119
166
GVPWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0006_2242
Arabidopsis lyrata
Al_scaffold_0006_2242
N
0.881
Carubv10003231m.g
Capsella rubella
Carubv10003231m.g
I
0.772
Cagra.25796s0001
Capsella grandiflora
Cagra.25796s0001
I
0.770
Bra029380
Brassica rapa
Bra029380
N
0.734
Bra009699
Brassica rapa
Bra009699
I
0.722
Bostr.10199s0068
Boechera stricta
Bostr.10199s0068
I
0.720
Carubv10027693m.g
Capsella rubella
Carubv10027693m.g
N
0.715
Bo2g160810
Brassica oleracea
Bo2g160810
N
0.715
Bo7g097510
Brassica oleracea
Bo7g097510
I
0.713
Cagra.4850s0001
Capsella grandiflora
Cagra.4850s0001
N
0.688
Thhalv10005383m.g
Eutrema salsugineum
Thhalv10005383m.g
I
0.672