Bo9g071530 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo9g071530 T267617_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.710 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g071530.1 Myb 36 87

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo2g134900 Brassica oleracea Bo2g134900 I 0.844
Bra026618 Brassica rapa Bra026618 I 0.837
Thhalv10004791m.g Eutrema salsugineum Thhalv10004791m.g I 0.837
Bo7g080160 Brassica oleracea Bo7g080160 I 0.831
Bra024836 Brassica rapa Bra024836 I 0.831
Bo8g106700 Brassica oleracea Bo8g106700 I 0.783
Bra026818 Brassica rapa Bra026818 I 0.783
Bostr.0556s0031 Boechera stricta Bostr.0556s0031 I 0.777
Cagra.0549s0004 Capsella grandiflora Cagra.0549s0004 I 0.777
fgenesh2_kg.5__121__AT2G02060.1 Arabidopsis lyrata fgenesh2_kg.5__121__AT2G02060.1 I 0.777
Carubv10017538m.g Capsella rubella Carubv10017538m.g I 0.777
AT2G02060 Arabidopsis thaliana AT2G02060 I 0.777
estExt_fgenesh1_pg.C_1660037 Physcomitrella patens estExt_fgenesh1_pg.C_1660037 I 0.744
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I 0.735
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.735
chr5.LjT14K23.60.nc Lotus japonicus chr5.LjT14K23.60.nc I 0.732
SapurV1A.0015s0960 Salix purpurea SapurV1A.0015s0960 I 0.729
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I 0.729
PGSC0003DMG400029440 Solanum tuberosum PGSC0003DMG400029440 I 0.729
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I 0.729
POPTR_0008s14140 Populus trichocarpa POPTR_0008s14140 I 0.729
fgenesh2_pg.scaffold_137000062 Physcomitrella patens fgenesh2_pg.scaffold_137000062 I 0.726
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.726
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.724
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I 0.717
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I 0.717
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.717
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I 0.717
TCM_030248 Theobroma cacao TCM_030248 I 0.717
BRADI3G51410 Brachypodium distachyon BRADI3G51410 I 0.715
OBART02G27470 Oryza barthii OBART02G27470 I 0.714
OMERI02G26760 Oryza meridionalis OMERI02G26760 I 0.714
OLONG_000346 Oryza longistaminata OLONG_000346 I 0.714
ONIVA02G30300 Oryza nivara ONIVA02G30300 I 0.714
OGLUM02G28020 Oryza glumaepatula OGLUM02G28020 I 0.714
orange1.1g020303m.g Citrus sinensis orange1.1g020303m.g I 0.714
Ciclev10005466m.g Citrus clementina Ciclev10005466m.g I 0.714
Ca_05422 Cicer arietinum Ca_05422 I 0.714
Ca_14800 Cicer arietinum Ca_14800 I 0.714
ORGLA02G0236600 Oryza glaberrima ORGLA02G0236600 I 0.714
OPUNC02G25130 Oryza punctata OPUNC02G25130 I 0.714
ORUFI02G28930 Oryza rufipogon ORUFI02G28930 I 0.714
GLYMA20G00861 Glycine max GLYMA20G00861 I 0.714
BGIOSGA008790 Oryza indica BGIOSGA008790 I 0.714
GLYMA20G24290 Glycine max GLYMA20G24290 I 0.714
MTR_0223s0040 Medicago truncatula MTR_0223s0040 I 0.714
GLYMA07G19585 Glycine max GLYMA07G19585 I 0.714
MTR_1g112370 Medicago truncatula MTR_1g112370 I 0.714
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I 0.713
GSMUA_Achr11G01510_001 Musa acuminata GSMUA_Achr11G01510_001 I 0.711
GSMUA_Achr2G11010_001 Musa acuminata GSMUA_Achr2G11010_001 I 0.711
Aquca_002_01368 Aquilegia coerulea Aquca_002_01368 I 0.711
SapurV1A.0203s0150 Salix purpurea SapurV1A.0203s0150 I 0.711
Eucgr.B02627 Eucalyptus grandis Eucgr.B02627 I 0.711
GSMUA_AchrUn_randomG06480_001 Musa acuminata GSMUA_AchrUn_randomG06480_001 I 0.711
cassava20298.m1 Manihot esculenta cassava20298.m1 I 0.711
TCM_011166 Theobroma cacao TCM_011166 I 0.711
VIT_01s0137g00050 Vitis vinifera VIT_01s0137g00050 I 0.711
29780.m001368 Ricinus communis 29780.m001368 I 0.711
Gorai.002G169300 Gossypium raimondii Gorai.002G169300 I 0.711
evm.TU.supercontig_2.82 Carica papaya evm.TU.supercontig_2.82 I 0.711
cassava27240.m1 Manihot esculenta cassava27240.m1 I 0.711
Bostr.24340s0004 Boechera stricta Bostr.24340s0004 I 0.710
fgenesh2_kg.1__1592__AT1G14600.1 Arabidopsis lyrata fgenesh2_kg.1__1592__AT1G14600.1 I 0.710
Cagra.3501s0036 Capsella grandiflora Cagra.3501s0036 I 0.710
Bra026202 Brassica rapa Bra026202 I 0.710
Bo5g019810 Brassica oleracea Bo5g019810 I 0.710
AT1G14600 Arabidopsis thaliana AT1G14600 D 0.710
Carubv10010057m.g Capsella rubella Carubv10010057m.g I 0.710
MDP0000321302 Malus domestica MDP0000321302 I 0.708
MDP0000234120 Malus domestica MDP0000234120 I 0.708
GRMZM2G090230 Zea mays GRMZM2G090230 I 0.706
POPTR_0021s00430 Populus trichocarpa POPTR_0021s00430 I 0.706
fgenesh2_pg.scaffold_82000058 Physcomitrella patens fgenesh2_pg.scaffold_82000058 I 0.705
GSMUA_Achr4G25920_001 Musa acuminata GSMUA_Achr4G25920_001 I 0.702
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.696
Ca_00645 Cicer arietinum Ca_00645 I 0.696
MTR_2g023580 Medicago truncatula MTR_2g023580 I 0.696
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.696
gene19641-v1.0-hybrid Fragaria vesca gene19641-v1.0-hybrid I 0.696
LPERR02G22340 Leersia perrieri LPERR02G22340 I 0.696
gene00600-v1.0-hybrid Fragaria vesca gene00600-v1.0-hybrid I 0.696
PK23854.1 Cannabis sativa PK23854.1 I 0.696
Thhalv10008620m.g Eutrema salsugineum Thhalv10008620m.g I 0.694
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I 0.692
SELMODRAFT_438636 Selaginella moellendorffii SELMODRAFT_438636 I 0.692
SELMODRAFT_426960 Selaginella moellendorffii SELMODRAFT_426960 I 0.692
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.691
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.691
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.691
Traes_1BL_E2629CBC1 Triticum aestivum Traes_1BL_E2629CBC1 I 0.690
Solyc04g008480.1 Solanum lycopersicum Solyc04g008480.1 I 0.689
Sb05g000480 Sorghum bicolor Sb05g000480 I 0.683
BRADI5G18590 Brachypodium distachyon BRADI5G18590 N 0.682
F775_22605 Aegilops tauschii F775_22605 I 0.681
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.678
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.678
29842.m003572 Ricinus communis 29842.m003572 I 0.678
SapurV1A.0067s0500 Salix purpurea SapurV1A.0067s0500 I 0.677
AMTR_s00037p00221530 Amborella trichopoda AMTR_s00037p00221530 I 0.677
GRMZM2G069525 Zea mays GRMZM2G069525 I 0.675
Pavir.J09702 Panicum virgatum Pavir.J09702 I 0.675
Si011884m.g Setaria italica Si011884m.g I 0.675
MLOC_56821 Hordeum vulgare MLOC_56821 I 0.674
Eucgr.D01346 Eucalyptus grandis Eucgr.D01346 I 0.672
OLONG_004539 Oryza longistaminata OLONG_004539 I 0.671
LPERR10G13190 Leersia perrieri LPERR10G13190 I 0.671
OB03G12320 Oryza brachyantha OB03G12320 I 0.671
OLONG_011732 Oryza longistaminata OLONG_011732 I 0.671
LPERR03G02180 Leersia perrieri LPERR03G02180 I 0.671
OB10G24340 Oryza brachyantha OB10G24340 I 0.671
BGIOSGA031479 Oryza indica BGIOSGA031479 I 0.671
OBART03G02370 Oryza barthii OBART03G02370 I 0.671
OBART10G17270 Oryza barthii OBART10G17270 I 0.671
Pavir.Ia04483 Panicum virgatum Pavir.Ia04483 I 0.671
OGLUM03G02310 Oryza glumaepatula OGLUM03G02310 I 0.671
BGIOSGA011527 Oryza indica BGIOSGA011527 I 0.671
evm.TU.supercontig_2794.2 Carica papaya evm.TU.supercontig_2794.2 I 0.671
OPUNC03G02160 Oryza punctata OPUNC03G02160 I 0.671
ORUFI10G18320 Oryza rufipogon ORUFI10G18320 I 0.671
ORUFI03G02110 Oryza rufipogon ORUFI03G02110 I 0.671
GRMZM5G887276 Zea mays GRMZM5G887276 I 0.671
Sb01g048420 Sorghum bicolor Sb01g048420 I 0.671
Si036127m.g Setaria italica Si036127m.g I 0.671
Pavir.Ib00180 Panicum virgatum Pavir.Ib00180 I 0.671
ORGLA10G0122800 Oryza glaberrima ORGLA10G0122800 I 0.671
ONIVA03G01980 Oryza nivara ONIVA03G01980 I 0.671
OMERI10G13750 Oryza meridionalis OMERI10G13750 I 0.671
ONIVA10G19340 Oryza nivara ONIVA10G19340 I 0.671
OPUNC10G15550 Oryza punctata OPUNC10G15550 I 0.671
OMERI03G02220 Oryza meridionalis OMERI03G02220 I 0.671
ORGLA03G0021400 Oryza glaberrima ORGLA03G0021400 I 0.671
SapurV1A.0650s0140 Salix purpurea SapurV1A.0650s0140 I 0.668
POPTR_0010s19310 Populus trichocarpa POPTR_0010s19310 I 0.668
Bostr.7199s0006 Boechera stricta Bostr.7199s0006 I 0.668
OB02G34860 Oryza brachyantha OB02G34860 I 0.668
AT4G04605 Arabidopsis thaliana AT4G04605 I 0.668
Bo2g104640 Brassica oleracea Bo2g104640 I 0.668
Cagra.4137s0009 Capsella grandiflora Cagra.4137s0009 I 0.668
Ciclev10029989m.g Citrus clementina Ciclev10029989m.g I 0.668
Carubv10003097m.g Capsella rubella Carubv10003097m.g I 0.668
orange1.1g041956m.g Citrus sinensis orange1.1g041956m.g I 0.668
PDK_20s1474441g001 Phoenix dactylifera PDK_20s1474441g001 I 0.665
Sb06g025600 Sorghum bicolor Sb06g025600 I 0.665
Pavir.Gb01051 Panicum virgatum Pavir.Gb01051 I 0.663
AMTR_s00044p00042560 Amborella trichopoda AMTR_s00044p00042560 I 0.662
GRMZM2G106185 Zea mays GRMZM2G106185 I 0.661