CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g071530
(
Brassica oleracea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bo9g071530
T267617_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.710
0.830
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g071530.1
Myb
36
87
RLKWTADLHRCFVNAVDMLGGQHRATPKLVLKMMDVKGLTISHVKSHLQMHR
Links
Other
Myb/SANT
family TFs
Other
Brassica oleracea
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g134900
Brassica oleracea
Bo2g134900
I
0.844
Bra026618
Brassica rapa
Bra026618
I
0.837
Thhalv10004791m.g
Eutrema salsugineum
Thhalv10004791m.g
I
0.837
Bo7g080160
Brassica oleracea
Bo7g080160
I
0.831
Bra024836
Brassica rapa
Bra024836
I
0.831
Bo8g106700
Brassica oleracea
Bo8g106700
I
0.783
Bra026818
Brassica rapa
Bra026818
I
0.783
Bostr.0556s0031
Boechera stricta
Bostr.0556s0031
I
0.777
Cagra.0549s0004
Capsella grandiflora
Cagra.0549s0004
I
0.777
fgenesh2_kg.5__121__AT2G02060.1
Arabidopsis lyrata
fgenesh2_kg.5__121__AT2G02060.1
I
0.777
Carubv10017538m.g
Capsella rubella
Carubv10017538m.g
I
0.777
AT2G02060
Arabidopsis thaliana
AT2G02060
I
0.777
estExt_fgenesh1_pg.C_1660037
Physcomitrella patens
estExt_fgenesh1_pg.C_1660037
I
0.744
Solyc02g080860.1
Solanum lycopersicum
Solyc02g080860.1
I
0.735
Lus10001149.g
Linum usitatissimum
Lus10001149.g
I
0.735
chr5.LjT14K23.60.nc
Lotus japonicus
chr5.LjT14K23.60.nc
I
0.732
SapurV1A.0015s0960
Salix purpurea
SapurV1A.0015s0960
I
0.729
GSMUA_Achr5G19200_001
Musa acuminata
GSMUA_Achr5G19200_001
I
0.729
PGSC0003DMG400029440
Solanum tuberosum
PGSC0003DMG400029440
I
0.729
POPTR_0010s10990
Populus trichocarpa
POPTR_0010s10990
I
0.729
POPTR_0008s14140
Populus trichocarpa
POPTR_0008s14140
I
0.729
fgenesh2_pg.scaffold_137000062
Physcomitrella patens
fgenesh2_pg.scaffold_137000062
I
0.726
Gorai.009G329400
Gossypium raimondii
Gorai.009G329400
I
0.726
VIT_13s0067g01500
Vitis vinifera
VIT_13s0067g01500
I
0.724
SapurV1A.3361s0010
Salix purpurea
SapurV1A.3361s0010
I
0.717
SapurV1A.0429s0100
Salix purpurea
SapurV1A.0429s0100
I
0.717
Gorai.010G181100
Gossypium raimondii
Gorai.010G181100
I
0.717
POPTR_0004s01060
Populus trichocarpa
POPTR_0004s01060
I
0.717
TCM_030248
Theobroma cacao
TCM_030248
I
0.717
BRADI3G51410
Brachypodium distachyon
BRADI3G51410
I
0.715
OBART02G27470
Oryza barthii
OBART02G27470
I
0.714
OMERI02G26760
Oryza meridionalis
OMERI02G26760
I
0.714
OLONG_000346
Oryza longistaminata
OLONG_000346
I
0.714
ONIVA02G30300
Oryza nivara
ONIVA02G30300
I
0.714
OGLUM02G28020
Oryza glumaepatula
OGLUM02G28020
I
0.714
orange1.1g020303m.g
Citrus sinensis
orange1.1g020303m.g
I
0.714
Ciclev10005466m.g
Citrus clementina
Ciclev10005466m.g
I
0.714
Ca_05422
Cicer arietinum
Ca_05422
I
0.714
Ca_14800
Cicer arietinum
Ca_14800
I
0.714
ORGLA02G0236600
Oryza glaberrima
ORGLA02G0236600
I
0.714
OPUNC02G25130
Oryza punctata
OPUNC02G25130
I
0.714
ORUFI02G28930
Oryza rufipogon
ORUFI02G28930
I
0.714
GLYMA20G00861
Glycine max
GLYMA20G00861
I
0.714
BGIOSGA008790
Oryza indica
BGIOSGA008790
I
0.714
GLYMA20G24290
Glycine max
GLYMA20G24290
I
0.714
MTR_0223s0040
Medicago truncatula
MTR_0223s0040
I
0.714
GLYMA07G19585
Glycine max
GLYMA07G19585
I
0.714
MTR_1g112370
Medicago truncatula
MTR_1g112370
I
0.714
VIT_00s1624g00010
Vitis vinifera
VIT_00s1624g00010
I
0.713
GSMUA_Achr11G01510_001
Musa acuminata
GSMUA_Achr11G01510_001
I
0.711
GSMUA_Achr2G11010_001
Musa acuminata
GSMUA_Achr2G11010_001
I
0.711
Aquca_002_01368
Aquilegia coerulea
Aquca_002_01368
I
0.711
SapurV1A.0203s0150
Salix purpurea
SapurV1A.0203s0150
I
0.711
Eucgr.B02627
Eucalyptus grandis
Eucgr.B02627
I
0.711
GSMUA_AchrUn_randomG06480_001
Musa acuminata
GSMUA_AchrUn_randomG06480_001
I
0.711
cassava20298.m1
Manihot esculenta
cassava20298.m1
I
0.711
TCM_011166
Theobroma cacao
TCM_011166
I
0.711
VIT_01s0137g00050
Vitis vinifera
VIT_01s0137g00050
I
0.711
29780.m001368
Ricinus communis
29780.m001368
I
0.711
Gorai.002G169300
Gossypium raimondii
Gorai.002G169300
I
0.711
evm.TU.supercontig_2.82
Carica papaya
evm.TU.supercontig_2.82
I
0.711
cassava27240.m1
Manihot esculenta
cassava27240.m1
I
0.711
Bostr.24340s0004
Boechera stricta
Bostr.24340s0004
I
0.710
fgenesh2_kg.1__1592__AT1G14600.1
Arabidopsis lyrata
fgenesh2_kg.1__1592__AT1G14600.1
I
0.710
Cagra.3501s0036
Capsella grandiflora
Cagra.3501s0036
I
0.710
Bra026202
Brassica rapa
Bra026202
I
0.710
Bo5g019810
Brassica oleracea
Bo5g019810
I
0.710
AT1G14600
Arabidopsis thaliana
AT1G14600
D
0.710
Carubv10010057m.g
Capsella rubella
Carubv10010057m.g
I
0.710
MDP0000321302
Malus domestica
MDP0000321302
I
0.708
MDP0000234120
Malus domestica
MDP0000234120
I
0.708
GRMZM2G090230
Zea mays
GRMZM2G090230
I
0.706
POPTR_0021s00430
Populus trichocarpa
POPTR_0021s00430
I
0.706
fgenesh2_pg.scaffold_82000058
Physcomitrella patens
fgenesh2_pg.scaffold_82000058
I
0.705
GSMUA_Achr4G25920_001
Musa acuminata
GSMUA_Achr4G25920_001
I
0.702
GLYMA09G00685
Glycine max
GLYMA09G00685
I
0.696
Ca_00645
Cicer arietinum
Ca_00645
I
0.696
MTR_2g023580
Medicago truncatula
MTR_2g023580
I
0.696
GLYMA15G11576
Glycine max
GLYMA15G11576
I
0.696
gene19641-v1.0-hybrid
Fragaria vesca
gene19641-v1.0-hybrid
I
0.696
LPERR02G22340
Leersia perrieri
LPERR02G22340
I
0.696
gene00600-v1.0-hybrid
Fragaria vesca
gene00600-v1.0-hybrid
I
0.696
PK23854.1
Cannabis sativa
PK23854.1
I
0.696
Thhalv10008620m.g
Eutrema salsugineum
Thhalv10008620m.g
I
0.694
estExt_fgenesh1_pg.C_550102
Physcomitrella patens
estExt_fgenesh1_pg.C_550102
I
0.692
SELMODRAFT_438636
Selaginella moellendorffii
SELMODRAFT_438636
I
0.692
SELMODRAFT_426960
Selaginella moellendorffii
SELMODRAFT_426960
I
0.692
PDK_20s1498711g001
Phoenix dactylifera
PDK_20s1498711g001
I
0.691
orange1.1g029903m.g
Citrus sinensis
orange1.1g029903m.g
I
0.691
Ciclev10032941m.g
Citrus clementina
Ciclev10032941m.g
I
0.691
Traes_1BL_E2629CBC1
Triticum aestivum
Traes_1BL_E2629CBC1
I
0.690
Solyc04g008480.1
Solanum lycopersicum
Solyc04g008480.1
I
0.689
Sb05g000480
Sorghum bicolor
Sb05g000480
I
0.683
BRADI5G18590
Brachypodium distachyon
BRADI5G18590
N
0.682
F775_22605
Aegilops tauschii
F775_22605
I
0.681
PRUPE_ppa015662mg
Prunus persica
PRUPE_ppa015662mg
I
0.678
cassava15362.m1
Manihot esculenta
cassava15362.m1
I
0.678
29842.m003572
Ricinus communis
29842.m003572
I
0.678
SapurV1A.0067s0500
Salix purpurea
SapurV1A.0067s0500
I
0.677
AMTR_s00037p00221530
Amborella trichopoda
AMTR_s00037p00221530
I
0.677
GRMZM2G069525
Zea mays
GRMZM2G069525
I
0.675
Pavir.J09702
Panicum virgatum
Pavir.J09702
I
0.675
Si011884m.g
Setaria italica
Si011884m.g
I
0.675
MLOC_56821
Hordeum vulgare
MLOC_56821
I
0.674
Eucgr.D01346
Eucalyptus grandis
Eucgr.D01346
I
0.672
OLONG_004539
Oryza longistaminata
OLONG_004539
I
0.671
LPERR10G13190
Leersia perrieri
LPERR10G13190
I
0.671
OB03G12320
Oryza brachyantha
OB03G12320
I
0.671
OLONG_011732
Oryza longistaminata
OLONG_011732
I
0.671
LPERR03G02180
Leersia perrieri
LPERR03G02180
I
0.671
OB10G24340
Oryza brachyantha
OB10G24340
I
0.671
BGIOSGA031479
Oryza indica
BGIOSGA031479
I
0.671
OBART03G02370
Oryza barthii
OBART03G02370
I
0.671
OBART10G17270
Oryza barthii
OBART10G17270
I
0.671
Pavir.Ia04483
Panicum virgatum
Pavir.Ia04483
I
0.671
OGLUM03G02310
Oryza glumaepatula
OGLUM03G02310
I
0.671
BGIOSGA011527
Oryza indica
BGIOSGA011527
I
0.671
evm.TU.supercontig_2794.2
Carica papaya
evm.TU.supercontig_2794.2
I
0.671
OPUNC03G02160
Oryza punctata
OPUNC03G02160
I
0.671
ORUFI10G18320
Oryza rufipogon
ORUFI10G18320
I
0.671
ORUFI03G02110
Oryza rufipogon
ORUFI03G02110
I
0.671
GRMZM5G887276
Zea mays
GRMZM5G887276
I
0.671
Sb01g048420
Sorghum bicolor
Sb01g048420
I
0.671
Si036127m.g
Setaria italica
Si036127m.g
I
0.671
Pavir.Ib00180
Panicum virgatum
Pavir.Ib00180
I
0.671
ORGLA10G0122800
Oryza glaberrima
ORGLA10G0122800
I
0.671
ONIVA03G01980
Oryza nivara
ONIVA03G01980
I
0.671
OMERI10G13750
Oryza meridionalis
OMERI10G13750
I
0.671
ONIVA10G19340
Oryza nivara
ONIVA10G19340
I
0.671
OPUNC10G15550
Oryza punctata
OPUNC10G15550
I
0.671
OMERI03G02220
Oryza meridionalis
OMERI03G02220
I
0.671
ORGLA03G0021400
Oryza glaberrima
ORGLA03G0021400
I
0.671
SapurV1A.0650s0140
Salix purpurea
SapurV1A.0650s0140
I
0.668
POPTR_0010s19310
Populus trichocarpa
POPTR_0010s19310
I
0.668
Bostr.7199s0006
Boechera stricta
Bostr.7199s0006
I
0.668
OB02G34860
Oryza brachyantha
OB02G34860
I
0.668
AT4G04605
Arabidopsis thaliana
AT4G04605
I
0.668
Bo2g104640
Brassica oleracea
Bo2g104640
I
0.668
Cagra.4137s0009
Capsella grandiflora
Cagra.4137s0009
I
0.668
Ciclev10029989m.g
Citrus clementina
Ciclev10029989m.g
I
0.668
Carubv10003097m.g
Capsella rubella
Carubv10003097m.g
I
0.668
orange1.1g041956m.g
Citrus sinensis
orange1.1g041956m.g
I
0.668
PDK_20s1474441g001
Phoenix dactylifera
PDK_20s1474441g001
I
0.665
Sb06g025600
Sorghum bicolor
Sb06g025600
I
0.665
Pavir.Gb01051
Panicum virgatum
Pavir.Gb01051
I
0.663
AMTR_s00044p00042560
Amborella trichopoda
AMTR_s00044p00042560
I
0.662
GRMZM2G106185
Zea mays
GRMZM2G106185
I
0.661