Solyc04g008480.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc04g008480.1 T280094_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.695 0.809
PK26523.1
M01283_2.00 		Cannabis sativa
NWHATTCYNN
NNRGAATDWN		 PBM
Lambert et al.(2019)
pTH11304 		0.669 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g008480.1.1 Myb 20 71

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400029440 Solanum tuberosum PGSC0003DMG400029440 I 0.869
GSMUA_AchrUn_randomG06480_001 Musa acuminata GSMUA_AchrUn_randomG06480_001 I 0.833
OLONG_004539 Oryza longistaminata OLONG_004539 I 0.812
OGLUM03G02310 Oryza glumaepatula OGLUM03G02310 I 0.812
OLONG_011732 Oryza longistaminata OLONG_011732 I 0.812
OMERI03G02220 Oryza meridionalis OMERI03G02220 I 0.812
OBART10G17270 Oryza barthii OBART10G17270 I 0.812
OB10G24340 Oryza brachyantha OB10G24340 I 0.812
LPERR03G02180 Leersia perrieri LPERR03G02180 I 0.812
LPERR10G13190 Leersia perrieri LPERR10G13190 I 0.812
OB03G12320 Oryza brachyantha OB03G12320 I 0.812
OMERI10G13750 Oryza meridionalis OMERI10G13750 I 0.812
OBART03G02370 Oryza barthii OBART03G02370 I 0.812
ONIVA03G01980 Oryza nivara ONIVA03G01980 I 0.812
ORUFI10G18320 Oryza rufipogon ORUFI10G18320 I 0.812
Sb01g048420 Sorghum bicolor Sb01g048420 I 0.812
Pavir.Ia04483 Panicum virgatum Pavir.Ia04483 I 0.812
Pavir.Ib00180 Panicum virgatum Pavir.Ib00180 I 0.812
ORUFI03G02110 Oryza rufipogon ORUFI03G02110 I 0.812
ORGLA10G0122800 Oryza glaberrima ORGLA10G0122800 I 0.812
ONIVA10G19340 Oryza nivara ONIVA10G19340 I 0.812
OPUNC03G02160 Oryza punctata OPUNC03G02160 I 0.812
OPUNC10G15550 Oryza punctata OPUNC10G15550 I 0.812
ORGLA03G0021400 Oryza glaberrima ORGLA03G0021400 I 0.812
GRMZM5G887276 Zea mays GRMZM5G887276 I 0.812
Si036127m.g Setaria italica Si036127m.g I 0.812
BGIOSGA011527 Oryza indica BGIOSGA011527 I 0.812
BGIOSGA031479 Oryza indica BGIOSGA031479 I 0.812
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I 0.809
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I 0.809
AMTR_s00044p00042560 Amborella trichopoda AMTR_s00044p00042560 I 0.802
GRMZM2G374986 Zea mays GRMZM2G374986 I 0.797
SapurV1A.0203s0150 Salix purpurea SapurV1A.0203s0150 I 0.791
evm.TU.supercontig_2.82 Carica papaya evm.TU.supercontig_2.82 I 0.791
VIT_01s0137g00050 Vitis vinifera VIT_01s0137g00050 I 0.791
TCM_011166 Theobroma cacao TCM_011166 I 0.791
cassava20298.m1 Manihot esculenta cassava20298.m1 I 0.791
Aquca_002_01368 Aquilegia coerulea Aquca_002_01368 I 0.791
GSMUA_Achr11G01510_001 Musa acuminata GSMUA_Achr11G01510_001 I 0.791
29780.m001368 Ricinus communis 29780.m001368 I 0.791
GSMUA_Achr2G11010_001 Musa acuminata GSMUA_Achr2G11010_001 I 0.791
PK23854.1 Cannabis sativa PK23854.1 I 0.776
chr5.LjT14K23.60.nc Lotus japonicus chr5.LjT14K23.60.nc I 0.776
Gorai.002G169300 Gossypium raimondii Gorai.002G169300 I 0.773
SapurV1A.0015s0960 Salix purpurea SapurV1A.0015s0960 I 0.773
Eucgr.B02627 Eucalyptus grandis Eucgr.B02627 I 0.773
cassava27240.m1 Manihot esculenta cassava27240.m1 I 0.773
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.772
gene00600-v1.0-hybrid Fragaria vesca gene00600-v1.0-hybrid I 0.769
POPTR_0008s14140 Populus trichocarpa POPTR_0008s14140 I 0.766
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.764
Bra026618 Brassica rapa Bra026618 I 0.761
AT2G02060 Arabidopsis thaliana AT2G02060 I 0.761
Carubv10017538m.g Capsella rubella Carubv10017538m.g I 0.761
Cagra.0549s0004 Capsella grandiflora Cagra.0549s0004 I 0.761
Thhalv10004791m.g Eutrema salsugineum Thhalv10004791m.g I 0.761
fgenesh2_kg.5__121__AT2G02060.1 Arabidopsis lyrata fgenesh2_kg.5__121__AT2G02060.1 I 0.761
Bostr.0556s0031 Boechera stricta Bostr.0556s0031 I 0.761
OGLUM10G17290 Oryza glumaepatula OGLUM10G17290 I 0.759
GLYMA20G00861 Glycine max GLYMA20G00861 I 0.758
orange1.1g020303m.g Citrus sinensis orange1.1g020303m.g I 0.758
GLYMA07G19585 Glycine max GLYMA07G19585 I 0.758
GLYMA20G24290 Glycine max GLYMA20G24290 I 0.758
Ca_05422 Cicer arietinum Ca_05422 I 0.758
MTR_1g112370 Medicago truncatula MTR_1g112370 I 0.758
Ciclev10005466m.g Citrus clementina Ciclev10005466m.g I 0.758
MTR_0223s0040 Medicago truncatula MTR_0223s0040 I 0.758
Ca_14800 Cicer arietinum Ca_14800 I 0.758
Bra024836 Brassica rapa Bra024836 I 0.755
Bo7g080160 Brassica oleracea Bo7g080160 I 0.755
TCM_030248 Theobroma cacao TCM_030248 I 0.754
Bo2g134900 Brassica oleracea Bo2g134900 I 0.754
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I 0.754
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I 0.754
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I 0.754
MDP0000321302 Malus domestica MDP0000321302 I 0.752
MDP0000234120 Malus domestica MDP0000234120 I 0.752
POPTR_0021s00430 Populus trichocarpa POPTR_0021s00430 I 0.743
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.743
PDK_20s1474441g001 Phoenix dactylifera PDK_20s1474441g001 I 0.738
orange1.1g017464m.g Citrus sinensis orange1.1g017464m.g I 0.738
Ciclev10011992m.g Citrus clementina Ciclev10011992m.g I 0.738
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.736
Traes_1BL_E2629CBC1 Triticum aestivum Traes_1BL_E2629CBC1 I 0.734
SELMODRAFT_426960 Selaginella moellendorffii SELMODRAFT_426960 I 0.729
SELMODRAFT_438636 Selaginella moellendorffii SELMODRAFT_438636 I 0.729
Cla017202 Citrullus lanatus Cla017202 I 0.727
PRUPE_ppa021540mg Prunus persica PRUPE_ppa021540mg I 0.727
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.715
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.715
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I 0.714
SapurV1A.0067s0500 Salix purpurea SapurV1A.0067s0500 I 0.714
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I 0.711
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.710
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.710
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.710
F775_13531 Aegilops tauschii F775_13531 I 0.709
TRIUR3_11585 Triticum urartu TRIUR3_11585 I 0.709
Traes_5BL_0C6735099 Triticum aestivum Traes_5BL_0C6735099 I 0.709
MLOC_72013 Hordeum vulgare MLOC_72013 I 0.709
GSMUA_Achr4G25920_001 Musa acuminata GSMUA_Achr4G25920_001 I 0.703
Sb05g000480 Sorghum bicolor Sb05g000480 I 0.703
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I 0.702
evm.TU.supercontig_2794.2 Carica papaya evm.TU.supercontig_2794.2 I 0.701
Cucsa.277160 Cucumis sativus Cucsa.277160 I 0.700
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.697
29842.m003572 Ricinus communis 29842.m003572 I 0.697
Ca_00645 Cicer arietinum Ca_00645 I 0.697
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.697
Bo5g019810 Brassica oleracea Bo5g019810 I 0.695
Bostr.24340s0004 Boechera stricta Bostr.24340s0004 I 0.695
AT1G14600 Arabidopsis thaliana AT1G14600 D 0.695
fgenesh2_kg.1__1592__AT1G14600.1 Arabidopsis lyrata fgenesh2_kg.1__1592__AT1G14600.1 I 0.695
Bra026202 Brassica rapa Bra026202 I 0.695
Cagra.3501s0036 Capsella grandiflora Cagra.3501s0036 I 0.695
Carubv10010057m.g Capsella rubella Carubv10010057m.g I 0.695
Aquca_066_00001 Aquilegia coerulea Aquca_066_00001 I 0.693
Eucgr.D01346 Eucalyptus grandis Eucgr.D01346 I 0.691
BGIOSGA008790 Oryza indica BGIOSGA008790 I 0.690
OPUNC02G25130 Oryza punctata OPUNC02G25130 I 0.690
ORGLA02G0236600 Oryza glaberrima ORGLA02G0236600 I 0.690
ORUFI02G28930 Oryza rufipogon ORUFI02G28930 I 0.690
OBART02G27470 Oryza barthii OBART02G27470 I 0.690
LPERR02G22340 Leersia perrieri LPERR02G22340 I 0.690
OLONG_000346 Oryza longistaminata OLONG_000346 I 0.690
ONIVA02G30300 Oryza nivara ONIVA02G30300 I 0.690
OMERI02G26760 Oryza meridionalis OMERI02G26760 I 0.690
OGLUM02G28020 Oryza glumaepatula OGLUM02G28020 I 0.690
MTR_2g023580 Medicago truncatula MTR_2g023580 I 0.689
Bo9g071530 Brassica oleracea Bo9g071530 I 0.689
SapurV1A.0650s0140 Salix purpurea SapurV1A.0650s0140 I 0.687
TRIUR3_10881 Triticum urartu TRIUR3_10881 I 0.687
POPTR_0010s19310 Populus trichocarpa POPTR_0010s19310 I 0.687
Traes_4AL_72ECC7747 Triticum aestivum Traes_4AL_72ECC7747 I 0.687
LPERR11G00400 Leersia perrieri LPERR11G00400 I 0.687
Traes_4DS_99EC36CD4 Triticum aestivum Traes_4DS_99EC36CD4 I 0.687
F775_29879 Aegilops tauschii F775_29879 I 0.687
Pavir.J33581 Panicum virgatum Pavir.J33581 I 0.685
Si039234m.g Setaria italica Si039234m.g I 0.685
Bo6g035910 Brassica oleracea Bo6g035910 I 0.684
Bra038033 Brassica rapa Bra038033 I 0.684
MLOC_56821 Hordeum vulgare MLOC_56821 I 0.684
Pm010236 Prunus mume Pm010236 I 0.683
mgf019744m Mimulus guttatus mgf019744m I 0.683
TCM_027630 Theobroma cacao TCM_027630 I 0.682
LPERR03G14050 Leersia perrieri LPERR03G14050 I 0.682
Ciclev10030185m.g Citrus clementina Ciclev10030185m.g I 0.682
orange1.1g011006m.g Citrus sinensis orange1.1g011006m.g I 0.682
OB03G25800 Oryza brachyantha OB03G25800 I 0.682
Gorai.009G120900 Gossypium raimondii Gorai.009G120900 I 0.682
cassava35980.valid.m1 Manihot esculenta cassava35980.valid.m1 I 0.682
cassava39270.m1 Manihot esculenta cassava39270.m1 I 0.682
cassava35979.valid.m1 Manihot esculenta cassava35979.valid.m1 I 0.682
Pavir.J16957 Panicum virgatum Pavir.J16957 I 0.681
Pavir.J01622 Panicum virgatum Pavir.J01622 I 0.681
BRADI1G71910 Brachypodium distachyon BRADI1G71910 I 0.681
SELMODRAFT_414222 Selaginella moellendorffii SELMODRAFT_414222 I 0.680
Gorai.011G291200 Gossypium raimondii Gorai.011G291200 I 0.680
SELMODRAFT_422768 Selaginella moellendorffii SELMODRAFT_422768 I 0.680
Thhalv10008620m.g Eutrema salsugineum Thhalv10008620m.g I 0.679
SapurV1A.0061s0540 Salix purpurea SapurV1A.0061s0540 I 0.676
estExt_fgenesh1_pg.C_1660037 Physcomitrella patens estExt_fgenesh1_pg.C_1660037 I 0.676
fgenesh2_pg.scaffold_137000062 Physcomitrella patens fgenesh2_pg.scaffold_137000062 I 0.676
POPTR_0008s07170 Populus trichocarpa POPTR_0008s07170 I 0.676
fgenesh2_pg.scaffold_82000058 Physcomitrella patens fgenesh2_pg.scaffold_82000058 I 0.673
29814.m000747 Ricinus communis 29814.m000747 I 0.672
BRADI1G63530 Brachypodium distachyon BRADI1G63530 I 0.671
SELMODRAFT_424890 Selaginella moellendorffii SELMODRAFT_424890 I 0.671
SELMODRAFT_423935 Selaginella moellendorffii SELMODRAFT_423935 I 0.671
OB12G10410 Oryza brachyantha OB12G10410 I 0.669
Pm018961 Prunus mume Pm018961 I 0.669
27757.m000022 Ricinus communis 27757.m000022 I 0.669
OB11G10130 Oryza brachyantha OB11G10130 I 0.669
cassava41268.m1 Manihot esculenta cassava41268.m1 I 0.669
PK26523.1 Cannabis sativa PK26523.1 D 0.669
TCM_042189 Theobroma cacao TCM_042189 I 0.669
Ciclev10029989m.g Citrus clementina Ciclev10029989m.g I 0.669
Gorai.009G112300 Gossypium raimondii Gorai.009G112300 I 0.669
cassava33845.m1 Manihot esculenta cassava33845.m1 I 0.669
SapurV1A.0905s0010 Salix purpurea SapurV1A.0905s0010 I 0.669
AMTR_s00021p00013790 Amborella trichopoda AMTR_s00021p00013790 I 0.669
orange1.1g041956m.g Citrus sinensis orange1.1g041956m.g I 0.669
cassava21831.m1 Manihot esculenta cassava21831.m1 I 0.669
PRUPE_ppa025397mg Prunus persica PRUPE_ppa025397mg I 0.669
evm.TU.supercontig_19.148 Carica papaya evm.TU.supercontig_19.148 I 0.669
TCM_042463 Theobroma cacao TCM_042463 I 0.669
cassava11204.m1 Manihot esculenta cassava11204.m1 I 0.668
Bo8g106700 Brassica oleracea Bo8g106700 I 0.664
Bra026818 Brassica rapa Bra026818 I 0.664
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.664
GRMZM5G846506 Zea mays GRMZM5G846506 I 0.663
Sb08g000510 Sorghum bicolor Sb08g000510 I 0.663
Si010342m.g Setaria italica Si010342m.g I 0.663
Si026524m.g Setaria italica Si026524m.g I 0.663
BRADI4G44930 Brachypodium distachyon BRADI4G44930 I 0.663
MDP0000617021 Malus domestica MDP0000617021 I 0.663
POPTR_0016s12940 Populus trichocarpa POPTR_0016s12940 I 0.663
Pm009670 Prunus mume Pm009670 I 0.662
TCM_001942 Theobroma cacao TCM_001942 I 0.661