CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra036015
(
Brassica rapa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bra036015
T268107_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN
NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.702
0.872
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra036015.1-P
Myb
125
175
KVDWTPELHRNFVQAVEQLGIDKAVPSRILEIMNVKSLTRHNVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Brassica rapa
TFs
233 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_43537
Hordeum vulgare
MLOC_43537
I
0.800
LPERR06G12880
Leersia perrieri
LPERR06G12880
I
0.800
ORGLA06G0126200
Oryza glaberrima
ORGLA06G0126200
I
0.800
OPUNC06G13180
Oryza punctata
OPUNC06G13180
I
0.800
BRADI1G43710
Brachypodium distachyon
BRADI1G43710
I
0.800
ORUFI06G15000
Oryza rufipogon
ORUFI06G15000
I
0.800
OGLUM06G15080
Oryza glumaepatula
OGLUM06G15080
I
0.800
Sb10g008400
Sorghum bicolor
Sb10g008400
I
0.800
GLK1
Oryza sativa
OS06G0348800
I
0.800
Si006400m.g
Setaria italica
Si006400m.g
I
0.800
Traes_7DL_58DDB90E3
Triticum aestivum
Traes_7DL_58DDB90E3
I
0.800
ONIVA06G16920
Oryza nivara
ONIVA06G16920
I
0.800
F775_20285
Aegilops tauschii
F775_20285
I
0.800
OMERI06G15340
Oryza meridionalis
OMERI06G15340
I
0.800
BGIOSGA022875
Oryza indica
BGIOSGA022875
I
0.800
Pavir.Db01285
Panicum virgatum
Pavir.Db01285
I
0.800
OBART03G02540
Oryza barthii
OBART03G02540
I
0.800
OB06G22250
Oryza brachyantha
OB06G22250
I
0.800
GSMUA_Achr2G15250_001
Musa acuminata
GSMUA_Achr2G15250_001
I
0.791
GRMZM2G087804
Zea mays
GRMZM2G087804
I
0.789
Sb03g000400
Sorghum bicolor
Sb03g000400
I
0.789
Pavir.Eb00063
Panicum virgatum
Pavir.Eb00063
I
0.789
Si001336m.g
Setaria italica
Si001336m.g
I
0.789
BRADI2G08287
Brachypodium distachyon
BRADI2G08287
I
0.782
Pavir.Ea00014
Panicum virgatum
Pavir.Ea00014
I
0.781
Carubv10026528m.g
Capsella rubella
Carubv10026528m.g
I
0.771
OGLUM01G10130
Oryza glumaepatula
OGLUM01G10130
I
0.771
OMERI01G08840
Oryza meridionalis
OMERI01G08840
I
0.771
OPUNC01G08680
Oryza punctata
OPUNC01G08680
I
0.771
GSMUA_Achr10G26160_001
Musa acuminata
GSMUA_Achr10G26160_001
I
0.771
Thhalv10003223m.g
Eutrema salsugineum
Thhalv10003223m.g
I
0.771
GLK2
Arabidopsis thaliana
AT5G44190
I
0.771
fgenesh2_kg.8__391__AT5G44190.1
Arabidopsis lyrata
fgenesh2_kg.8__391__AT5G44190.1
I
0.771
ORUFI01G09620
Oryza rufipogon
ORUFI01G09620
I
0.771
ONIVA01G11450
Oryza nivara
ONIVA01G11450
I
0.771
LPERR01G08320
Leersia perrieri
LPERR01G08320
I
0.771
GLK2
Oryza sativa
OS01G0239000
I
0.771
Cagra.0381s0008
Capsella grandiflora
Cagra.0381s0008
I
0.771
GSMUA_Achr7G11040_001
Musa acuminata
GSMUA_Achr7G11040_001
I
0.771
Bostr.3148s0040
Boechera stricta
Bostr.3148s0040
I
0.771
TRIUR3_15856
Triticum urartu
TRIUR3_15856
I
0.747
Pavir.J11422
Panicum virgatum
Pavir.J11422
I
0.747
GRMZM2G026833
Zea mays
GRMZM2G026833
I
0.740
GSMUA_Achr6G05850_001
Musa acuminata
GSMUA_Achr6G05850_001
I
0.740
ORGLA01G0079000
Oryza glaberrima
ORGLA01G0079000
I
0.738
BGIOSGA002040
Oryza indica
BGIOSGA002040
I
0.738
Cucsa.313480
Cucumis sativus
Cucsa.313480
I
0.724
OB01G18980
Oryza brachyantha
OB01G18980
I
0.718
MTR_4g078810
Medicago truncatula
MTR_4g078810
I
0.711
Bra033726
Brassica rapa
Bra033726
I
0.709
Bo7g067200
Brassica oleracea
Bo7g067200
I
0.709
GPRI1
Arabidopsis thaliana
AT2G20570
D
0.702
Lus10039883.g
Linum usitatissimum
Lus10039883.g
I
0.702
Carubv10014114m.g
Capsella rubella
Carubv10014114m.g
I
0.702
Lus10033642.g
Linum usitatissimum
Lus10033642.g
I
0.702
Lus10018649.g
Linum usitatissimum
Lus10018649.g
I
0.702
GPRI1
Arabidopsis lyrata
fgenesh2_kg.3__3588__AT2G20570.1
I
0.702
Cucsa.087530
Cucumis sativus
Cucsa.087530
I
0.702
Bostr.7903s0106
Boechera stricta
Bostr.7903s0106
I
0.702
Cla003791
Citrullus lanatus
Cla003791
I
0.702
Cagra.2516s0014
Capsella grandiflora
Cagra.2516s0014
I
0.702
PGSC0003DMG400009378
Solanum tuberosum
PGSC0003DMG400009378
I
0.700
GPRI1
Vitis vinifera
VIT_12s0028g03100
I
0.700
Ca_11268
Cicer arietinum
Ca_11268
I
0.700
Sb05g004150
Sorghum bicolor
Sb05g004150
I
0.700
Ca_02452
Cicer arietinum
Ca_02452
I
0.700
Solyc07g053630.2
Solanum lycopersicum
Solyc07g053630.2
I
0.700
MTR_2g090675
Medicago truncatula
MTR_2g090675
I
0.700
GLYMA12G13430
Glycine max
GLYMA12G13430
I
0.700
GLYMA13G37010
Glycine max
GLYMA13G37010
I
0.700
GLYMA12G33430
Glycine max
GLYMA12G33430
I
0.700
GLYMA06G44330
Glycine max
GLYMA06G44330
I
0.700
chr2.CM0021.770.nc
Lotus japonicus
chr2.CM0021.770.nc
I
0.696
AMTR_s00149p00035260
Amborella trichopoda
AMTR_s00149p00035260
I
0.696
GLYMA11G04441
Glycine max
GLYMA11G04441
I
0.696
GLYMA01G40900
Glycine max
GLYMA01G40900
I
0.696
Bo2g122230
Brassica oleracea
Bo2g122230
N
0.692
Eucgr.K01056
Eucalyptus grandis
Eucgr.K01056
I
0.691
Sb10g005580
Sorghum bicolor
Sb10g005580
I
0.690
OBART06G05360
Oryza barthii
OBART06G05360
I
0.690
GRMZM2G409974
Zea mays
GRMZM2G409974
I
0.690
Si006013m.g
Setaria italica
Si006013m.g
I
0.690
Sb04g035980
Sorghum bicolor
Sb04g035980
I
0.690
ONIVA06G06160
Oryza nivara
ONIVA06G06160
I
0.690
OB06G14930
Oryza brachyantha
OB06G14930
I
0.690
ORGLA02G0311700
Oryza glaberrima
ORGLA02G0311700
I
0.690
Si016546m.g
Setaria italica
Si016546m.g
I
0.690
TRIUR3_28229
Triticum urartu
TRIUR3_28229
I
0.690
F775_19079
Aegilops tauschii
F775_19079
I
0.690
Traes_7AS_DECB8080D
Triticum aestivum
Traes_7AS_DECB8080D
I
0.690
OMERI06G06380
Oryza meridionalis
OMERI06G06380
I
0.690
F775_14758
Aegilops tauschii
F775_14758
I
0.690
TCM_036926
Theobroma cacao
TCM_036926
I
0.690
TRIUR3_26858
Triticum urartu
TRIUR3_26858
I
0.690
Traes_7DS_327FBC2CA
Triticum aestivum
Traes_7DS_327FBC2CA
I
0.690
Pavir.Da02067
Panicum virgatum
Pavir.Da02067
I
0.690
GRMZM2G479110
Zea mays
GRMZM2G479110
I
0.690
OGLUM06G05540
Oryza glumaepatula
OGLUM06G05540
I
0.690
RR23
Oryza sativa
OS02G0796500
I
0.690
RR22
Oryza sativa
OS06G0183100
I
0.690
LPERR06G04900
Leersia perrieri
LPERR06G04900
I
0.690
ORUFI06G05490
Oryza rufipogon
ORUFI06G05490
I
0.690
ORGLA06G0048800
Oryza glaberrima
ORGLA06G0048800
I
0.690
MLOC_61880
Hordeum vulgare
MLOC_61880
I
0.690
MLOC_11341
Hordeum vulgare
MLOC_11341
I
0.690
Traes_7DS_22DE624A5
Triticum aestivum
Traes_7DS_22DE624A5
I
0.690
OPUNC06G05150
Oryza punctata
OPUNC06G05150
I
0.690
Pavir.J35630
Panicum virgatum
Pavir.J35630
I
0.690
OB02G42700
Oryza brachyantha
OB02G42700
I
0.690
RR23
Oryza indica
BGIOSGA005436
I
0.690
RR22
Oryza indica
BGIOSGA022430
I
0.690
Pavir.J08270
Panicum virgatum
Pavir.J08270
I
0.690
GLYMA17G16360
Glycine max
GLYMA17G16360
I
0.689
Bo8g102300
Brassica oleracea
Bo8g102300
I
0.687
Bo7g003410
Brassica oleracea
Bo7g003410
I
0.687
Bra031129
Brassica rapa
Bra031129
I
0.687
Gorai.010G243900
Gossypium raimondii
Gorai.010G243900
I
0.683
Cucsa.271670
Cucumis sativus
Cucsa.271670
I
0.682
cassava8114.valid.m1
Manihot esculenta
cassava8114.valid.m1
I
0.682
cassava43649.valid.m1
Manihot esculenta
cassava43649.valid.m1
I
0.682
Aquca_016_00168
Aquilegia coerulea
Aquca_016_00168
I
0.682
Pm014123
Prunus mume
Pm014123
I
0.682
Aquca_051_00026
Aquilegia coerulea
Aquca_051_00026
I
0.682
GLYMA06G06730
Glycine max
GLYMA06G06730
I
0.682
cassava43650.valid.m1
Manihot esculenta
cassava43650.valid.m1
I
0.682
GLYMA04G06650
Glycine max
GLYMA04G06650
I
0.682
MDP0000225179
Malus domestica
MDP0000225179
I
0.682
SapurV1A.0693s0070
Salix purpurea
SapurV1A.0693s0070
I
0.682
SapurV1A.0118s0260
Salix purpurea
SapurV1A.0118s0260
I
0.682
orange1.1g013528m.g
Citrus sinensis
orange1.1g013528m.g
I
0.682
SapurV1A.0730s0060
Salix purpurea
SapurV1A.0730s0060
I
0.682
SapurV1A.1950s0030
Salix purpurea
SapurV1A.1950s0030
I
0.682
PDK_20s1782651g001
Phoenix dactylifera
PDK_20s1782651g001
I
0.682
PDK_20s1342911g003
Phoenix dactylifera
PDK_20s1342911g003
I
0.682
PK27491.1
Cannabis sativa
PK27491.1
I
0.682
orange1.1g005465m.g
Citrus sinensis
orange1.1g005465m.g
I
0.682
MDP0000526864
Malus domestica
MDP0000526864
I
0.682
gene17750-v1.0-hybrid
Fragaria vesca
gene17750-v1.0-hybrid
I
0.682
Eucgr.A01857
Eucalyptus grandis
Eucgr.A01857
I
0.682
Ciclev10015266m.g
Citrus clementina
Ciclev10015266m.g
I
0.682
Gorai.002G020300
Gossypium raimondii
Gorai.002G020300
I
0.682
Gorai.008G155000
Gossypium raimondii
Gorai.008G155000
I
0.682
Pm005710
Prunus mume
Pm005710
I
0.682
Gorai.012G126600
Gossypium raimondii
Gorai.012G126600
I
0.682
Ciclev10007639m.g
Citrus clementina
Ciclev10007639m.g
I
0.682
29983.m003131
Ricinus communis
29983.m003131
I
0.682
GLYMA14G13320
Glycine max
GLYMA14G13320
I
0.682
PRUPE_ppa024819mg
Prunus persica
PRUPE_ppa024819mg
I
0.682
TRAES3BF062500050CFD_g
Triticum aestivum
TRAES3BF062500050CFD_g
I
0.682
POPTR_0007s01230
Populus trichocarpa
POPTR_0007s01230
I
0.682
AMTR_s00058p00133630
Amborella trichopoda
AMTR_s00058p00133630
I
0.682
TCM_008193
Theobroma cacao
TCM_008193
I
0.682
PRUPE_ppa014599mg
Prunus persica
PRUPE_ppa014599mg
I
0.682
VIT_04s0008g05900
Vitis vinifera
VIT_04s0008g05900
I
0.682
Cla021325
Citrullus lanatus
Cla021325
I
0.682
POPTR_0017s04720
Populus trichocarpa
POPTR_0017s04720
I
0.682
GSMUA_Achr11G17740_001
Musa acuminata
GSMUA_Achr11G17740_001
I
0.680
chr3.CM0160.680.nd
Lotus japonicus
chr3.CM0160.680.nd
I
0.678
GLYMA05G06070
Glycine max
GLYMA05G06070
I
0.677
Gorai.003G180100
Gossypium raimondii
Gorai.003G180100
I
0.677
Gorai.008G228800
Gossypium raimondii
Gorai.008G228800
I
0.677
Ca_02285
Cicer arietinum
Ca_02285
I
0.677
Solyc05g054390.2
Solanum lycopersicum
Solyc05g054390.2
I
0.672
Gorai.011G196400
Gossypium raimondii
Gorai.011G196400
I
0.672
PGSC0003DMG400023534
Solanum tuberosum
PGSC0003DMG400023534
I
0.672
Ciclev10004470m.g
Citrus clementina
Ciclev10004470m.g
I
0.672
Solyc01g065540.2
Solanum lycopersicum
Solyc01g065540.2
I
0.672
TCM_021300
Theobroma cacao
TCM_021300
I
0.672
evm.TU.supercontig_9.105
Carica papaya
evm.TU.supercontig_9.105
I
0.672
29889.m003245
Ricinus communis
29889.m003245
I
0.672
Eucgr.A00189
Eucalyptus grandis
Eucgr.A00189
I
0.672
Cla022101
Citrullus lanatus
Cla022101
I
0.672
MTR_4g121020
Medicago truncatula
MTR_4g121020
I
0.672
PGSC0003DMG401025624
Solanum tuberosum
PGSC0003DMG401025624
I
0.672
PRUPE_ppa002408mg
Prunus persica
PRUPE_ppa002408mg
I
0.672
MDP0000290818
Malus domestica
MDP0000290818
I
0.672
POPTR_0008s22990
Populus trichocarpa
POPTR_0008s22990
I
0.672
MDP0000224740
Malus domestica
MDP0000224740
I
0.672
cassava43032.valid.m1
Manihot esculenta
cassava43032.valid.m1
I
0.672
Cucsa.252760
Cucumis sativus
Cucsa.252760
I
0.672
Ca_02989
Cicer arietinum
Ca_02989
I
0.672
Cla009424
Citrullus lanatus
Cla009424
I
0.672
GLYMA07G37220
Glycine max
GLYMA07G37220
I
0.672
SELMODRAFT_173793
Selaginella moellendorffii
SELMODRAFT_173793
I
0.672
SELMODRAFT_450181
Selaginella moellendorffii
SELMODRAFT_450181
I
0.672
GLYMA17G03380
Glycine max
GLYMA17G03380
I
0.672
POPTR_0010s00320
Populus trichocarpa
POPTR_0010s00320
I
0.672
PK26059.1
Cannabis sativa
PK26059.1
I
0.672
Gorai.002G029200
Gossypium raimondii
Gorai.002G029200
I
0.672
Aquca_003_00615
Aquilegia coerulea
Aquca_003_00615
I
0.672
VIT_05s0077g01480
Vitis vinifera
VIT_05s0077g01480
I
0.672
Cagra.1595s0002
Capsella grandiflora
Cagra.1595s0002
I
0.670
Carubv10004540m.g
Capsella rubella
Carubv10004540m.g
I
0.670
PGSC0003DMG400024217
Solanum tuberosum
PGSC0003DMG400024217
I
0.669
chr4.CM0831.100.nd
Lotus japonicus
chr4.CM0831.100.nd
I
0.669
cassava42048.valid.m1
Manihot esculenta
cassava42048.valid.m1
I
0.669
Solyc08g077230.2
Solanum lycopersicum
Solyc08g077230.2
I
0.669
cassava42047.valid.m1
Manihot esculenta
cassava42047.valid.m1
I
0.669
Ca_12825
Cicer arietinum
Ca_12825
I
0.669
Gorai.009G061000
Gossypium raimondii
Gorai.009G061000
I
0.668
Solyc07g005140.2
Solanum lycopersicum
Solyc07g005140.2
I
0.667
mgf001591m
Mimulus guttatus
mgf001591m
I
0.667
VIT_11s0206g00060
Vitis vinifera
VIT_11s0206g00060
I
0.667
mgf014863m
Mimulus guttatus
mgf014863m
I
0.667
PGSC0003DMG400003196
Solanum tuberosum
PGSC0003DMG400003196
I
0.667
cassava9823.m1
Manihot esculenta
cassava9823.m1
I
0.666
GLYMA15G15520
Glycine max
GLYMA15G15520
I
0.666
PGSC0003DMG400029514
Solanum tuberosum
PGSC0003DMG400029514
I
0.665
SapurV1A.0055s0320
Salix purpurea
SapurV1A.0055s0320
I
0.665
AMTR_s00176p00045260
Amborella trichopoda
AMTR_s00176p00045260
I
0.665
POPTR_0010s11600
Populus trichocarpa
POPTR_0010s11600
I
0.665
GSMUA_Achr8G30850_001
Musa acuminata
GSMUA_Achr8G30850_001
I
0.665
GSMUA_Achr1G22230_001
Musa acuminata
GSMUA_Achr1G22230_001
I
0.665
evm.TU.supercontig_2.186
Carica papaya
evm.TU.supercontig_2.186
I
0.665
27647.m000179
Ricinus communis
27647.m000179
I
0.665
orange1.1g005938m.g
Citrus sinensis
orange1.1g005938m.g
I
0.665
ARR14
Vitis vinifera
VIT_01s0011g05830
I
0.665
Aquca_091_00086
Aquilegia coerulea
Aquca_091_00086
I
0.665
TCM_011067
Theobroma cacao
TCM_011067
I
0.665
Ciclev10014527m.g
Citrus clementina
Ciclev10014527m.g
I
0.665
GRMZM2G401835
Zea mays
GRMZM2G401835
I
0.665
Solyc04g008050.2
Solanum lycopersicum
Solyc04g008050.2
I
0.665
Gorai.005G156900
Gossypium raimondii
Gorai.005G156900
I
0.665
Eucgr.G02094
Eucalyptus grandis
Eucgr.G02094
I
0.665
mgf012846m
Mimulus guttatus
mgf012846m
I
0.664
PDK_20s1362511g001
Phoenix dactylifera
PDK_20s1362511g001
I
0.664
mgf007181m
Mimulus guttatus
mgf007181m
I
0.664
mgf010113m
Mimulus guttatus
mgf010113m
I
0.663
Cagra.2235s0034
Capsella grandiflora
Cagra.2235s0034
I
0.663
mgf012203m
Mimulus guttatus
mgf012203m
I
0.663
Carubv10018465m.g
Capsella rubella
Carubv10018465m.g
I
0.663
MTR_4g098870
Medicago truncatula
MTR_4g098870
I
0.662
Traes_7AS_503B57D77
Triticum aestivum
Traes_7AS_503B57D77
I
0.662