Bra036015 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra036015 T268107_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GPRI1
M00874_2.00 		Arabidopsis thaliana
NNDATHN
NDATHNN		 PBM
Franco-Zorrilla et al.(2014)
GLK1 		0.702 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra036015.1-P Myb 125 175

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_43537 Hordeum vulgare MLOC_43537 I 0.800
LPERR06G12880 Leersia perrieri LPERR06G12880 I 0.800
ORGLA06G0126200 Oryza glaberrima ORGLA06G0126200 I 0.800
OPUNC06G13180 Oryza punctata OPUNC06G13180 I 0.800
BRADI1G43710 Brachypodium distachyon BRADI1G43710 I 0.800
ORUFI06G15000 Oryza rufipogon ORUFI06G15000 I 0.800
OGLUM06G15080 Oryza glumaepatula OGLUM06G15080 I 0.800
Sb10g008400 Sorghum bicolor Sb10g008400 I 0.800
GLK1 Oryza sativa OS06G0348800 I 0.800
Si006400m.g Setaria italica Si006400m.g I 0.800
Traes_7DL_58DDB90E3 Triticum aestivum Traes_7DL_58DDB90E3 I 0.800
ONIVA06G16920 Oryza nivara ONIVA06G16920 I 0.800
F775_20285 Aegilops tauschii F775_20285 I 0.800
OMERI06G15340 Oryza meridionalis OMERI06G15340 I 0.800
BGIOSGA022875 Oryza indica BGIOSGA022875 I 0.800
Pavir.Db01285 Panicum virgatum Pavir.Db01285 I 0.800
OBART03G02540 Oryza barthii OBART03G02540 I 0.800
OB06G22250 Oryza brachyantha OB06G22250 I 0.800
GSMUA_Achr2G15250_001 Musa acuminata GSMUA_Achr2G15250_001 I 0.791
GRMZM2G087804 Zea mays GRMZM2G087804 I 0.789
Sb03g000400 Sorghum bicolor Sb03g000400 I 0.789
Pavir.Eb00063 Panicum virgatum Pavir.Eb00063 I 0.789
Si001336m.g Setaria italica Si001336m.g I 0.789
BRADI2G08287 Brachypodium distachyon BRADI2G08287 I 0.782
Pavir.Ea00014 Panicum virgatum Pavir.Ea00014 I 0.781
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.771
OGLUM01G10130 Oryza glumaepatula OGLUM01G10130 I 0.771
OMERI01G08840 Oryza meridionalis OMERI01G08840 I 0.771
OPUNC01G08680 Oryza punctata OPUNC01G08680 I 0.771
GSMUA_Achr10G26160_001 Musa acuminata GSMUA_Achr10G26160_001 I 0.771
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.771
GLK2 Arabidopsis thaliana AT5G44190 I 0.771
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.771
ORUFI01G09620 Oryza rufipogon ORUFI01G09620 I 0.771
ONIVA01G11450 Oryza nivara ONIVA01G11450 I 0.771
LPERR01G08320 Leersia perrieri LPERR01G08320 I 0.771
GLK2 Oryza sativa OS01G0239000 I 0.771
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.771
GSMUA_Achr7G11040_001 Musa acuminata GSMUA_Achr7G11040_001 I 0.771
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.771
TRIUR3_15856 Triticum urartu TRIUR3_15856 I 0.747
Pavir.J11422 Panicum virgatum Pavir.J11422 I 0.747
GRMZM2G026833 Zea mays GRMZM2G026833 I 0.740
GSMUA_Achr6G05850_001 Musa acuminata GSMUA_Achr6G05850_001 I 0.740
ORGLA01G0079000 Oryza glaberrima ORGLA01G0079000 I 0.738
BGIOSGA002040 Oryza indica BGIOSGA002040 I 0.738
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.724
OB01G18980 Oryza brachyantha OB01G18980 I 0.718
MTR_4g078810 Medicago truncatula MTR_4g078810 I 0.711
Bra033726 Brassica rapa Bra033726 I 0.709
Bo7g067200 Brassica oleracea Bo7g067200 I 0.709
GPRI1 Arabidopsis thaliana AT2G20570 D 0.702
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.702
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.702
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.702
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.702
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.702
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.702
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.702
Cla003791 Citrullus lanatus Cla003791 I 0.702
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.702
PGSC0003DMG400009378 Solanum tuberosum PGSC0003DMG400009378 I 0.700
GPRI1 Vitis vinifera VIT_12s0028g03100 I 0.700
Ca_11268 Cicer arietinum Ca_11268 I 0.700
Sb05g004150 Sorghum bicolor Sb05g004150 I 0.700
Ca_02452 Cicer arietinum Ca_02452 I 0.700
Solyc07g053630.2 Solanum lycopersicum Solyc07g053630.2 I 0.700
MTR_2g090675 Medicago truncatula MTR_2g090675 I 0.700
GLYMA12G13430 Glycine max GLYMA12G13430 I 0.700
GLYMA13G37010 Glycine max GLYMA13G37010 I 0.700
GLYMA12G33430 Glycine max GLYMA12G33430 I 0.700
GLYMA06G44330 Glycine max GLYMA06G44330 I 0.700
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.696
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.696
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.696
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.696
Bo2g122230 Brassica oleracea Bo2g122230 N 0.692
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.691
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.690
OBART06G05360 Oryza barthii OBART06G05360 I 0.690
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.690
Si006013m.g Setaria italica Si006013m.g I 0.690
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.690
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.690
OB06G14930 Oryza brachyantha OB06G14930 I 0.690
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.690
Si016546m.g Setaria italica Si016546m.g I 0.690
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.690
F775_19079 Aegilops tauschii F775_19079 I 0.690
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.690
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.690
F775_14758 Aegilops tauschii F775_14758 I 0.690
TCM_036926 Theobroma cacao TCM_036926 I 0.690
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.690
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.690
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.690
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.690
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.690
RR23 Oryza sativa OS02G0796500 I 0.690
RR22 Oryza sativa OS06G0183100 I 0.690
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.690
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.690
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.690
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.690
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.690
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.690
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.690
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.690
OB02G42700 Oryza brachyantha OB02G42700 I 0.690
RR23 Oryza indica BGIOSGA005436 I 0.690
RR22 Oryza indica BGIOSGA022430 I 0.690
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.690
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.689
Bo8g102300 Brassica oleracea Bo8g102300 I 0.687
Bo7g003410 Brassica oleracea Bo7g003410 I 0.687
Bra031129 Brassica rapa Bra031129 I 0.687
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.683
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.682
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.682
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.682
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.682
Pm014123 Prunus mume Pm014123 I 0.682
Aquca_051_00026 Aquilegia coerulea Aquca_051_00026 I 0.682
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.682
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.682
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.682
MDP0000225179 Malus domestica MDP0000225179 I 0.682
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.682
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.682
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I 0.682
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.682
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.682
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.682
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.682
PK27491.1 Cannabis sativa PK27491.1 I 0.682
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.682
MDP0000526864 Malus domestica MDP0000526864 I 0.682
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.682
Eucgr.A01857 Eucalyptus grandis Eucgr.A01857 I 0.682
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.682
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.682
Gorai.008G155000 Gossypium raimondii Gorai.008G155000 I 0.682
Pm005710 Prunus mume Pm005710 I 0.682
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.682
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.682
29983.m003131 Ricinus communis 29983.m003131 I 0.682
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.682
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I 0.682
TRAES3BF062500050CFD_g Triticum aestivum TRAES3BF062500050CFD_g I 0.682
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.682
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.682
TCM_008193 Theobroma cacao TCM_008193 I 0.682
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.682
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.682
Cla021325 Citrullus lanatus Cla021325 I 0.682
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.682
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.680
chr3.CM0160.680.nd Lotus japonicus chr3.CM0160.680.nd I 0.678
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.677
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.677
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.677
Ca_02285 Cicer arietinum Ca_02285 I 0.677
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.672
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.672
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.672
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.672
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.672
TCM_021300 Theobroma cacao TCM_021300 I 0.672
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.672
29889.m003245 Ricinus communis 29889.m003245 I 0.672
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.672
Cla022101 Citrullus lanatus Cla022101 I 0.672
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.672
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.672
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.672
MDP0000290818 Malus domestica MDP0000290818 I 0.672
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.672
MDP0000224740 Malus domestica MDP0000224740 I 0.672
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.672
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.672
Ca_02989 Cicer arietinum Ca_02989 I 0.672
Cla009424 Citrullus lanatus Cla009424 I 0.672
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.672
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.672
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.672
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.672
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.672
PK26059.1 Cannabis sativa PK26059.1 I 0.672
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.672
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.672
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.672
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.670
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.670
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.669
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.669
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.669
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.669
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.669
Ca_12825 Cicer arietinum Ca_12825 I 0.669
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.668
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.667
mgf001591m Mimulus guttatus mgf001591m I 0.667
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.667
mgf014863m Mimulus guttatus mgf014863m I 0.667
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.667
cassava9823.m1 Manihot esculenta cassava9823.m1 I 0.666
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.666
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.665
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.665
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.665
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.665
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.665
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.665
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.665
27647.m000179 Ricinus communis 27647.m000179 I 0.665
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.665
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.665
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.665
TCM_011067 Theobroma cacao TCM_011067 I 0.665
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.665
GRMZM2G401835 Zea mays GRMZM2G401835 I 0.665
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.665
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.665
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.665
mgf012846m Mimulus guttatus mgf012846m I 0.664
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.664
mgf007181m Mimulus guttatus mgf007181m I 0.664
mgf010113m Mimulus guttatus mgf010113m I 0.663
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.663
mgf012203m Mimulus guttatus mgf012203m I 0.663
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.663
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.662
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I 0.662