AtMYB47 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pg.C_scaffold_1001691 T270666_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_1001691 Myb 14 61
fgenesh1_pg.C_scaffold_1001691 Myb 67 112

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7128s0480 Boechera stricta Bostr.7128s0480 N 0.860
Carubv10010045m.g Capsella rubella Carubv10010045m.g N 0.837
AtMYB47 Arabidopsis thaliana AT1G18710 N 0.828
Thhalv10008528m.g Eutrema salsugineum Thhalv10008528m.g N 0.820
Bra025678 Brassica rapa Bra025678 N 0.806
Bo5g025730 Brassica oleracea Bo5g025730 N 0.806
Bo8g091100 Brassica oleracea Bo8g091100 N 0.779
Bra016546 Brassica rapa Bra016546 N 0.778
Carubv10011014m.g Capsella rubella Carubv10011014m.g N 0.766
fgenesh1_pg.C_scaffold_1001692 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001692 N 0.762
Bra015911 Brassica rapa Bra015911 N 0.752
Bo6g118730 Brassica oleracea Bo6g118730 N 0.752
Thhalv10018987m.g Eutrema salsugineum Thhalv10018987m.g N 0.748
Carubv10010086m.g Capsella rubella Carubv10010086m.g N 0.747
Cagra.4153s0008 Capsella grandiflora Cagra.4153s0008 N 0.744
Bra003801 Brassica rapa Bra003801 N 0.743
Bostr.7128s0481 Boechera stricta Bostr.7128s0481 N 0.741
Bra015912 Brassica rapa Bra015912 N 0.734
Bo6g087030 Brassica oleracea Bo6g087030 N 0.734
Bo6g118710 Brassica oleracea Bo6g118710 N 0.734
Bo8g091080 Brassica oleracea Bo8g091080 N 0.723
Bo5g025790 Brassica oleracea Bo5g025790 N 0.717
MYB95 Arabidopsis thaliana AT1G74430 N 0.698
Bo8g068030 Brassica oleracea Bo8g068030 N 0.695
MYB95 Arabidopsis lyrata fgenesh2_kg.2__1707__AT1G74430.1 N 0.683
Bostr.3288s0088 Boechera stricta Bostr.3288s0088 N 0.681
Bo2g081100 Brassica oleracea Bo2g081100 N 0.679
Bra008149 Brassica rapa Bra008149 N 0.676
Carubv10020753m.g Capsella rubella Carubv10020753m.g N 0.667