CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10008528m.g
(
Eutrema salsugineum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Thhalv10008528m.g
T290002_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10008528m
Myb
14
61
KGEWTAEEDQKLVAYINEHGTCDWRSLPQRAGLQRCGKSCRLRWLNYL
Thhalv10008528m
Myb
67
112
RGKFTAQEEEDVIKLHAVLGNRWAAIAKQMENRTDNDIKNHWNSCL
Links
Other
Myb/SANT
family TFs
Other
Eutrema salsugineum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.7128s0480
Boechera stricta
Bostr.7128s0480
N
0.820
AtMYB47
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1001691
N
0.820
Bra025678
Brassica rapa
Bra025678
N
0.805
Bo5g025730
Brassica oleracea
Bo5g025730
N
0.805
AtMYB47
Arabidopsis thaliana
AT1G18710
N
0.783
Carubv10010045m.g
Capsella rubella
Carubv10010045m.g
N
0.772
Bra016546
Brassica rapa
Bra016546
N
0.772
Bo8g091100
Brassica oleracea
Bo8g091100
N
0.754
Bra015911
Brassica rapa
Bra015911
N
0.727
Bo6g118730
Brassica oleracea
Bo6g118730
N
0.727
Thhalv10018987m.g
Eutrema salsugineum
Thhalv10018987m.g
N
0.727
Carubv10010086m.g
Capsella rubella
Carubv10010086m.g
N
0.726
Cagra.4153s0008
Capsella grandiflora
Cagra.4153s0008
N
0.723
Bostr.7128s0481
Boechera stricta
Bostr.7128s0481
N
0.720
Bra003801
Brassica rapa
Bra003801
N
0.718
Bo6g118710
Brassica oleracea
Bo6g118710
N
0.709
Bra015912
Brassica rapa
Bra015912
N
0.709
Bo6g087030
Brassica oleracea
Bo6g087030
N
0.709
fgenesh1_pg.C_scaffold_1001692
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1001692
N
0.697
Carubv10011014m.g
Capsella rubella
Carubv10011014m.g
N
0.681
MYB95
Arabidopsis thaliana
AT1G74430
N
0.673