OBART04G23600 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART04G23600 T275509_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.686 0.753
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.686 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART04G23600.1 Myb 15 64
OBART04G23600.1 Myb 70 115

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC04G21140 Oryza punctata OPUNC04G21140 I 0.909
ORGLA04G0201500 Oryza glaberrima ORGLA04G0201500 I 0.909
OS04G0593200 Oryza sativa OS04G0593200 I 0.909
OGLUM04G23540 Oryza glumaepatula OGLUM04G23540 I 0.909
ORUFI04G25320 Oryza rufipogon ORUFI04G25320 I 0.909
BGIOSGA014443 Oryza indica BGIOSGA014443 I 0.909
OB04G30520 Oryza brachyantha OB04G30520 I 0.906
ONIVA04G19830 Oryza nivara ONIVA04G19830 I 0.892
Si012660m.g Setaria italica Si012660m.g N 0.845
Traes_2AL_E5B3B79F7 Triticum aestivum Traes_2AL_E5B3B79F7 I 0.839
GRMZM2G081557 Zea mays GRMZM2G081557 N 0.837
F775_02773 Aegilops tauschii F775_02773 I 0.832
Pavir.Ga00758 Panicum virgatum Pavir.Ga00758 I 0.828
Pavir.Gb00812 Panicum virgatum Pavir.Gb00812 I 0.828
LPERR04G19330 Leersia perrieri LPERR04G19330 I 0.813
Traes_2DL_54D11D5E7 Triticum aestivum Traes_2DL_54D11D5E7 I 0.810
Traes_2AL_B01AE830F Triticum aestivum Traes_2AL_B01AE830F I 0.807
Traes_2AL_5EE86C5BC Triticum aestivum Traes_2AL_5EE86C5BC I 0.807
Traes_2BL_560CCE975 Triticum aestivum Traes_2BL_560CCE975 I 0.805
Traes_2AL_FBC0ED0EE Triticum aestivum Traes_2AL_FBC0ED0EE N 0.790
Traes_2DL_25FD0FFB4 Triticum aestivum Traes_2DL_25FD0FFB4 I 0.788
Traes_2DL_6BD0572DF Triticum aestivum Traes_2DL_6BD0572DF I 0.788
TRIUR3_26633 Triticum urartu TRIUR3_26633 I 0.784
Traes_2BL_C843D1851 Triticum aestivum Traes_2BL_C843D1851 N 0.766
Traes_2AL_1D7D3D0DE Triticum aestivum Traes_2AL_1D7D3D0DE N 0.747
Traes_2BL_88BBF0441 Triticum aestivum Traes_2BL_88BBF0441 N 0.733
Ca_11832 Cicer arietinum Ca_11832 I 0.720
GLYMA01G44370 Glycine max GLYMA01G44370 I 0.709
Pavir.Da02398 Panicum virgatum Pavir.Da02398 I 0.701
PRUPE_ppa007268mg Prunus persica PRUPE_ppa007268mg I 0.695
Pm018056 Prunus mume Pm018056 I 0.695
MTR_5g007370 Medicago truncatula MTR_5g007370 I 0.689
PK05754.1 Cannabis sativa PK05754.1 I 0.688
ONIVA06G00830 Oryza nivara ONIVA06G00830 I 0.687
BGIOSGA022168 Oryza indica BGIOSGA022168 I 0.687
OPUNC06G00590 Oryza punctata OPUNC06G00590 I 0.687
BGIOSGA022174 Oryza indica BGIOSGA022174 I 0.687
ORUFI06G00810 Oryza rufipogon ORUFI06G00810 I 0.687
OS06G0112700 Oryza sativa OS06G0112700 I 0.687
GSMUA_Achr4G19030_001 Musa acuminata GSMUA_Achr4G19030_001 I 0.687
OMERI06G00710 Oryza meridionalis OMERI06G00710 I 0.687
OBART06G00820 Oryza barthii OBART06G00820 I 0.687
MTR_4g478180 Medicago truncatula MTR_4g478180 I 0.687
OGLUM06G00580 Oryza glumaepatula OGLUM06G00580 I 0.687
BGIOSGA022169 Oryza indica BGIOSGA022169 I 0.687
Bo1g155040 Brassica oleracea Bo1g155040 I 0.686
Carubv10016434m.g Capsella rubella Carubv10016434m.g I 0.686
Bostr.19046s0006 Boechera stricta Bostr.19046s0006 I 0.686
Bra021382 Brassica rapa Bra021382 I 0.686
MYB107 Arabidopsis thaliana AT3G02940 D 0.686
Bra032028 Brassica rapa Bra032028 I 0.686
Thhalv10022405m.g Eutrema salsugineum Thhalv10022405m.g I 0.686
Cagra.1194s0007 Capsella grandiflora Cagra.1194s0007 I 0.686
MYB107 Arabidopsis lyrata fgenesh2_kg.3__241__AT3G02940.1 I 0.686
GLYMA03G01540 Glycine max GLYMA03G01540 I 0.685
GLYMA09G39721 Glycine max GLYMA09G39721 I 0.685
GLYMA18G46480 Glycine max GLYMA18G46480 I 0.685
Ca_13779 Cicer arietinum Ca_13779 I 0.684
MTR_8g031360 Medicago truncatula MTR_8g031360 I 0.684
Cucsa.318610 Cucumis sativus Cucsa.318610 I 0.682
Bo5g150350 Brassica oleracea Bo5g150350 I 0.681
Gorai.003G183700 Gossypium raimondii Gorai.003G183700 I 0.680
GLYMA11G01150 Glycine max GLYMA11G01150 I 0.679
gene19065-v1.0-hybrid Fragaria vesca gene19065-v1.0-hybrid I 0.677
MTR_7g076740 Medicago truncatula MTR_7g076740 I 0.676
chr1.CM0591.530.nd Lotus japonicus chr1.CM0591.530.nd I 0.675
30054.m000809 Ricinus communis 30054.m000809 I 0.673
GLYMA12G01960 Glycine max GLYMA12G01960 I 0.673
GLYMA07G07960 Glycine max GLYMA07G07960 I 0.672
evm.TU.supercontig_90.68 Carica papaya evm.TU.supercontig_90.68 I 0.671
Ca_06226 Cicer arietinum Ca_06226 I 0.669
Bo3g012180 Brassica oleracea Bo3g012180 I 0.667
Thhalv10014050m.g Eutrema salsugineum Thhalv10014050m.g I 0.667
AtMYB9 Arabidopsis thaliana AT5G16770 I 0.667
Bra006370 Brassica rapa Bra006370 I 0.667
Gorai.007G348600 Gossypium raimondii Gorai.007G348600 I 0.667
Cagra.0434s0044 Capsella grandiflora Cagra.0434s0044 I 0.667
Carubv10002573m.g Capsella rubella Carubv10002573m.g I 0.667
OB02G39890 Oryza brachyantha OB02G39890 I 0.666
Cla013211 Citrullus lanatus Cla013211 I 0.664
chr3.CM0127.290.nc Lotus japonicus chr3.CM0127.290.nc I 0.664
TCM_016551 Theobroma cacao TCM_016551 I 0.663
GLYMA06G10840 Glycine max GLYMA06G10840 I 0.662
GLYMA11G11570 Glycine max GLYMA11G11570 I 0.662
POPTR_0002s09720 Populus trichocarpa POPTR_0002s09720 I 0.662
GLYMA04G11040 Glycine max GLYMA04G11040 I 0.662
Bra008596 Brassica rapa Bra008596 I 0.661
Bostr.2618s0017 Boechera stricta Bostr.2618s0017 I 0.661