CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR04G19330
(
Leersia perrieri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
LPERR04G19330
T273713_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.681
0.763
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.681
0.763
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.666
0.731
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR04G19330.1
Myb
15
64
KGPWTEEEDRTLVEHIKKQGGHVGSWRGLPKAAGLNRCGKSCRLRWTNYL
LPERR04G19330.1
Myb
70
115
RGNFSDEEEHLIIRLHASLGNKWSTIATQLEGRTDNEIKNYWNTHI
Links
Other
Myb/SANT
family TFs
Other
Leersia perrieri
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2DL_6BD0572DF
Triticum aestivum
Traes_2DL_6BD0572DF
I
0.848
Traes_2DL_25FD0FFB4
Triticum aestivum
Traes_2DL_25FD0FFB4
I
0.848
Traes_2AL_B01AE830F
Triticum aestivum
Traes_2AL_B01AE830F
I
0.838
Traes_2AL_5EE86C5BC
Triticum aestivum
Traes_2AL_5EE86C5BC
I
0.838
Traes_2BL_560CCE975
Triticum aestivum
Traes_2BL_560CCE975
I
0.835
Traes_2DL_54D11D5E7
Triticum aestivum
Traes_2DL_54D11D5E7
I
0.821
Traes_2AL_E5B3B79F7
Triticum aestivum
Traes_2AL_E5B3B79F7
I
0.820
Traes_2AL_FBC0ED0EE
Triticum aestivum
Traes_2AL_FBC0ED0EE
N
0.820
OGLUM04G23540
Oryza glumaepatula
OGLUM04G23540
I
0.813
OBART04G23600
Oryza barthii
OBART04G23600
I
0.813
OPUNC04G21140
Oryza punctata
OPUNC04G21140
I
0.813
ORGLA04G0201500
Oryza glaberrima
ORGLA04G0201500
I
0.813
ORUFI04G25320
Oryza rufipogon
ORUFI04G25320
I
0.813
F775_02773
Aegilops tauschii
F775_02773
I
0.813
OS04G0593200
Oryza sativa
OS04G0593200
I
0.813
BGIOSGA014443
Oryza indica
BGIOSGA014443
I
0.813
OB04G30520
Oryza brachyantha
OB04G30520
I
0.810
TRIUR3_26633
Triticum urartu
TRIUR3_26633
I
0.804
ONIVA04G19830
Oryza nivara
ONIVA04G19830
I
0.796
Traes_2BL_C843D1851
Triticum aestivum
Traes_2BL_C843D1851
N
0.796
Traes_2BL_88BBF0441
Triticum aestivum
Traes_2BL_88BBF0441
N
0.794
Si012660m.g
Setaria italica
Si012660m.g
N
0.787
GRMZM2G081557
Zea mays
GRMZM2G081557
N
0.779
Pavir.Ga00758
Panicum virgatum
Pavir.Ga00758
I
0.770
Pavir.Gb00812
Panicum virgatum
Pavir.Gb00812
I
0.770
Traes_2AL_1D7D3D0DE
Triticum aestivum
Traes_2AL_1D7D3D0DE
N
0.758
PK05754.1
Cannabis sativa
PK05754.1
I
0.725
Ca_11832
Cicer arietinum
Ca_11832
I
0.707
Cucsa.318610
Cucumis sativus
Cucsa.318610
I
0.707
Pavir.Da02398
Panicum virgatum
Pavir.Da02398
I
0.705
MTR_8g031360
Medicago truncatula
MTR_8g031360
I
0.697
Ca_13779
Cicer arietinum
Ca_13779
I
0.697
chr1.CM0591.530.nd
Lotus japonicus
chr1.CM0591.530.nd
I
0.696
GLYMA03G01540
Glycine max
GLYMA03G01540
I
0.694
GLYMA09G39721
Glycine max
GLYMA09G39721
I
0.690
Cla013211
Citrullus lanatus
Cla013211
I
0.690
GLYMA18G46480
Glycine max
GLYMA18G46480
I
0.690
MTR_7g076740
Medicago truncatula
MTR_7g076740
I
0.689
gene19065-v1.0-hybrid
Fragaria vesca
gene19065-v1.0-hybrid
I
0.686
GLYMA07G07960
Glycine max
GLYMA07G07960
I
0.685
MTR_5g007370
Medicago truncatula
MTR_5g007370
I
0.684
Pm018056
Prunus mume
Pm018056
I
0.684
PRUPE_ppa007268mg
Prunus persica
PRUPE_ppa007268mg
I
0.684
BGIOSGA022168
Oryza indica
BGIOSGA022168
I
0.682
Ca_06226
Cicer arietinum
Ca_06226
I
0.682
BGIOSGA022174
Oryza indica
BGIOSGA022174
I
0.682
BGIOSGA022169
Oryza indica
BGIOSGA022169
I
0.682
ONIVA06G00830
Oryza nivara
ONIVA06G00830
I
0.682
OMERI06G00710
Oryza meridionalis
OMERI06G00710
I
0.682
OGLUM06G00580
Oryza glumaepatula
OGLUM06G00580
I
0.682
MTR_4g478180
Medicago truncatula
MTR_4g478180
I
0.682
OPUNC06G00590
Oryza punctata
OPUNC06G00590
I
0.682
OBART06G00820
Oryza barthii
OBART06G00820
I
0.682
ORUFI06G00810
Oryza rufipogon
ORUFI06G00810
I
0.682
OS06G0112700
Oryza sativa
OS06G0112700
I
0.682
Bo1g155040
Brassica oleracea
Bo1g155040
I
0.681
Bra021382
Brassica rapa
Bra021382
I
0.681
Bostr.19046s0006
Boechera stricta
Bostr.19046s0006
I
0.681
Cagra.1194s0007
Capsella grandiflora
Cagra.1194s0007
I
0.681
Bra032028
Brassica rapa
Bra032028
I
0.681
Carubv10016434m.g
Capsella rubella
Carubv10016434m.g
I
0.681
Thhalv10022405m.g
Eutrema salsugineum
Thhalv10022405m.g
I
0.681
MYB107
Arabidopsis thaliana
AT3G02940
D
0.681
MYB107
Arabidopsis lyrata
fgenesh2_kg.3__241__AT3G02940.1
I
0.681
Bo5g150350
Brassica oleracea
Bo5g150350
I
0.676
Carubv10002573m.g
Capsella rubella
Carubv10002573m.g
I
0.671
AtMYB9
Arabidopsis thaliana
AT5G16770
I
0.671
Bra006370
Brassica rapa
Bra006370
I
0.671
Cagra.0434s0044
Capsella grandiflora
Cagra.0434s0044
I
0.671
Thhalv10014050m.g
Eutrema salsugineum
Thhalv10014050m.g
I
0.671
Bo3g012180
Brassica oleracea
Bo3g012180
I
0.671
cassava25066.valid.m1
Manihot esculenta
cassava25066.valid.m1
I
0.669
GLYMA12G01960
Glycine max
GLYMA12G01960
I
0.668
evm.TU.supercontig_90.68
Carica papaya
evm.TU.supercontig_90.68
I
0.667
AtMYB17
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5002102
I
0.666
Gorai.003G183700
Gossypium raimondii
Gorai.003G183700
I
0.666
GLYMA11G01150
Glycine max
GLYMA11G01150
I
0.666
AtMYB17
Arabidopsis thaliana
AT3G61250
D
0.666
GLYMA01G44370
Glycine max
GLYMA01G44370
I
0.666
Bostr.2618s0017
Boechera stricta
Bostr.2618s0017
I
0.665
Bra008596
Brassica rapa
Bra008596
I
0.665
Cla021563
Citrullus lanatus
Cla021563
I
0.664
Cucsa.258270
Cucumis sativus
Cucsa.258270
I
0.664
Bostr.13158s0117
Boechera stricta
Bostr.13158s0117
I
0.663
Cagra.3373s0030
Capsella grandiflora
Cagra.3373s0030
I
0.663
Carubv10018382m.g
Capsella rubella
Carubv10018382m.g
I
0.663