Si003841m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si003841m.g T279707_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.665 0.717
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.664 0.750
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si003841m Myb 20 67
Si003841m Myb 73 117

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J05460 Panicum virgatum Pavir.J05460 I 0.857
Pavir.Eb01665 Panicum virgatum Pavir.Eb01665 N 0.856
Pavir.J35999 Panicum virgatum Pavir.J35999 I 0.810
OMERI01G22060 Oryza meridionalis OMERI01G22060 I 0.771
OGLUM01G27780 Oryza glumaepatula OGLUM01G27780 I 0.771
OBART01G24030 Oryza barthii OBART01G24030 I 0.771
ONIVA01G27030 Oryza nivara ONIVA01G27030 I 0.771
ORUFI01G26910 Oryza rufipogon ORUFI01G26910 I 0.771
OS01G0637800 Oryza sativa OS01G0637800 I 0.771
OB01G33330 Oryza brachyantha OB01G33330 I 0.771
OPUNC01G24010 Oryza punctata OPUNC01G24010 I 0.771
ORGLA01G0193500 Oryza glaberrima ORGLA01G0193500 I 0.771
BGIOSGA004072 Oryza indica BGIOSGA004072 I 0.771
BRADI2G44770 Brachypodium distachyon BRADI2G44770 I 0.771
Sb03g029050 Sorghum bicolor Sb03g029050 I 0.770
GRMZM2G143328 Zea mays GRMZM2G143328 I 0.768
TRIUR3_25064 Triticum urartu TRIUR3_25064 I 0.765
Si003965m.g Setaria italica Si003965m.g I 0.761
MLOC_5568 Hordeum vulgare MLOC_5568 I 0.761
TRAES3BF026200120CFD_g Triticum aestivum TRAES3BF026200120CFD_g I 0.755
F775_02242 Aegilops tauschii F775_02242 I 0.755
Traes_3DL_429583AEC Triticum aestivum Traes_3DL_429583AEC I 0.755
Pavir.Eb01664 Panicum virgatum Pavir.Eb01664 N 0.751
LPERR01G20550 Leersia perrieri LPERR01G20550 I 0.727
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.698
SapurV1A.0571s0200 Salix purpurea SapurV1A.0571s0200 I 0.690
POPTR_0001s35200 Populus trichocarpa POPTR_0001s35200 I 0.686
GSMUA_Achr9G07000_001 Musa acuminata GSMUA_Achr9G07000_001 I 0.679
Eucgr.I01782 Eucalyptus grandis Eucgr.I01782 I 0.672
GLYMA19G14270 Glycine max GLYMA19G14270 I 0.670
Gorai.001G263200 Gossypium raimondii Gorai.001G263200 I 0.669
Lus10022259.g Linum usitatissimum Lus10022259.g I 0.669
Gorai.006G030800 Gossypium raimondii Gorai.006G030800 I 0.669
Pm015692 Prunus mume Pm015692 I 0.669
TCM_016901 Theobroma cacao TCM_016901 I 0.669
GLYMA19G14230 Glycine max GLYMA19G14230 I 0.669
PRUPE_ppa011751mg Prunus persica PRUPE_ppa011751mg I 0.669
GLYMA16G07960 Glycine max GLYMA16G07960 I 0.669
Solyc02g067760.2 Solanum lycopersicum Solyc02g067760.2 I 0.668
Cucsa.339770 Cucumis sativus Cucsa.339770 I 0.668
Ciclev10016820m.g Citrus clementina Ciclev10016820m.g I 0.667
orange1.1g045384m.g Citrus sinensis orange1.1g045384m.g I 0.667
MTR_6g006030 Medicago truncatula MTR_6g006030 I 0.667
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.665
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.665
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.665
MYB24 Arabidopsis thaliana AT5G40350 D 0.665
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.665
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.665
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.665
GSMUA_Achr1G27270_001 Musa acuminata GSMUA_Achr1G27270_001 I 0.664
MYB05_ANTMA Antirrhinum majus MYB05_ANTMA D 0.664
PGSC0003DMG400000485 Solanum tuberosum PGSC0003DMG400000485 I 0.662
GLYMA19G00930 Glycine max GLYMA19G00930 I 0.662
GLYMA05G08690 Glycine max GLYMA05G08690 I 0.662