VIT_12s0028g00980 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_12s0028g00980 T282015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05732.1
M01276_2.00 		Cannabis sativa
HNATTCBNN
NNVGAATND		 PBM
Lambert et al.(2019)
pTH11367 		0.668 0.783
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_12s0028g00980.t01 Myb 19 69

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0354s0280 Salix purpurea SapurV1A.0354s0280 I 0.739
POPTR_0005s22750 Populus trichocarpa POPTR_0005s22750 N 0.731
SapurV1A.0076s0110 Salix purpurea SapurV1A.0076s0110 N 0.711
SapurV1A.1979s0020 Salix purpurea SapurV1A.1979s0020 N 0.711
Eucgr.A02031 Eucalyptus grandis Eucgr.A02031 I 0.711
POPTR_0002s05770 Populus trichocarpa POPTR_0002s05770 I 0.701
Pm009670 Prunus mume Pm009670 I 0.692
MDP0000312944 Malus domestica MDP0000312944 I 0.692
LjT01P07.20.nd Lotus japonicus LjT01P07.20.nd I 0.692
Cla014669 Citrullus lanatus Cla014669 I 0.692
evm.TU.supercontig_2794.2 Carica papaya evm.TU.supercontig_2794.2 I 0.692
Cucsa.045140 Cucumis sativus Cucsa.045140 I 0.692
PRUPE_ppa014847mg Prunus persica PRUPE_ppa014847mg I 0.692
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.689
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.689
PRUPE_ppa023518mg Prunus persica PRUPE_ppa023518mg I 0.689
TCM_001942 Theobroma cacao TCM_001942 I 0.684
MTR_2g016220 Medicago truncatula MTR_2g016220 I 0.684
Lus10029808.g Linum usitatissimum Lus10029808.g I 0.677
PGSC0003DMG400015893 Solanum tuberosum PGSC0003DMG400015893 I 0.673
MDP0000217637 Malus domestica MDP0000217637 I 0.672
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.671
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.671
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.671
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.671
Ca_00645 Cicer arietinum Ca_00645 I 0.671
29842.m003572 Ricinus communis 29842.m003572 I 0.671
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.671
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.671
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.671
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.671
PDK_20s1474441g001 Phoenix dactylifera PDK_20s1474441g001 I 0.670
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I 0.668
PK05732.1 Cannabis sativa PK05732.1 D 0.668
Pm014775 Prunus mume Pm014775 I 0.668
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I 0.668
GLYMA18G14071 Glycine max GLYMA18G14071 I 0.667
mgf023762m Mimulus guttatus mgf023762m I 0.665
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.665
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.665
MTR_2g023580 Medicago truncatula MTR_2g023580 I 0.663
MDP0000196504 Malus domestica MDP0000196504 I 0.663
MDP0000214282 Malus domestica MDP0000214282 I 0.663