Carubv10014434m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10014434m.g T286343_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10014434m Myb 63 111

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.3__781__AT3G07565.3 Arabidopsis lyrata fgenesh2_kg.3__781__AT3G07565.3 N 0.909
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N 0.909
AT3G07565 Arabidopsis thaliana AT3G07565 N 0.875
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N 0.875
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N 0.847
Bra001258 Brassica rapa Bra001258 N 0.820
Bo3g061340 Brassica oleracea Bo3g061340 N 0.820
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N 0.820
Bra029658 Brassica rapa Bra029658 N 0.820
Bra040015 Brassica rapa Bra040015 N 0.786
Bo1g147290 Brassica oleracea Bo1g147290 N 0.770
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N 0.719
30005.m001261 Ricinus communis 30005.m001261 N 0.712
TCM_002550 Theobroma cacao TCM_002550 N 0.694
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.694
MDP0000716430 Malus domestica MDP0000716430 N 0.687
MDP0000184998 Malus domestica MDP0000184998 N 0.687
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.683
Pm007242 Prunus mume Pm007242 N 0.681
PRUPE_ppa010592mg Prunus persica PRUPE_ppa010592mg N 0.681