evm.TU.supercontig_18.16 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_18.16 T287078_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYBP_MAIZE
M11057_2.00 		Zea mays
ACCWACCHN
NDGGTWGGT		 Transfac
Matys et al.(2006)
P$P_01 		0.693 0.771
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_18.16 Myb 14 61
evm.model.supercontig_18.16 Myb 67 89

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29889.m003258 Ricinus communis 29889.m003258 I 0.836
30076.m004682 Ricinus communis 30076.m004682 I 0.763
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.727
Pavir.J22834 Panicum virgatum Pavir.J22834 N 0.721
LjSGA_102038.1 Lotus japonicus LjSGA_102038.1 I 0.719
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I 0.709
OLONG_002280 Oryza longistaminata OLONG_002280 I 0.709
GRMZM2G016020 Zea mays GRMZM2G016020 I 0.700
GRMZM2G129872 Zea mays GRMZM2G129872 I 0.700
MYBP_MAIZE Zea mays MYBP_MAIZE D 0.693
CM0385.290.nd Lotus japonicus CM0385.290.nd I 0.693
GRMZM2G077789 Zea mays GRMZM2G077789 I 0.687
ORUFI03G21780 Oryza rufipogon ORUFI03G21780 N 0.685
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.679
F775_04823 Aegilops tauschii F775_04823 I 0.677
TRIUR3_28515 Triticum urartu TRIUR3_28515 N 0.677
Pavir.Cb00930 Panicum virgatum Pavir.Cb00930 N 0.677
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I 0.672
GRMZM2G000818 Zea mays GRMZM2G000818 I 0.672
mgf024704m Mimulus guttatus mgf024704m N 0.671
TRIUR3_10933 Triticum urartu TRIUR3_10933 N 0.671
mgf021550m Mimulus guttatus mgf021550m N 0.670
BGIOSGA003347 Oryza indica BGIOSGA003347 I 0.669
BGIOSGA010547 Oryza indica BGIOSGA010547 N 0.668
Pavir.Eb01225 Panicum virgatum Pavir.Eb01225 N 0.667
Pavir.J12840 Panicum virgatum Pavir.J12840 N 0.667
F775_20860 Aegilops tauschii F775_20860 I 0.667
29816.m000664 Ricinus communis 29816.m000664 N 0.666
MLOC_69570 Hordeum vulgare MLOC_69570 I 0.663
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I 0.663
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I 0.663
Pavir.Ea01343 Panicum virgatum Pavir.Ea01343 I 0.662
POPTR_0310s00210 Populus trichocarpa POPTR_0310s00210 N 0.662