Gorai.008G158000 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.008G158000 T287676_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.688 0.817
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.688 0.817
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G158000.1 Myb 13 54
Gorai.008G158000.1 Myb 61 85
Gorai.008G158000.1 Myb 91 136
Gorai.008G158000.2 Myb 13 60
Gorai.008G158000.2 Myb 66 111

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_009642 Theobroma cacao TCM_009642 I 0.727
Gorai.002G218600 Gossypium raimondii Gorai.002G218600 I 0.727
evm.TU.supercontig_798.1 Carica papaya evm.TU.supercontig_798.1 I 0.727
Lus10041435.g Linum usitatissimum Lus10041435.g I 0.724
Lus10034338.g Linum usitatissimum Lus10034338.g I 0.719
ATMYB2 Vitis vinifera VIT_07s0005g01950 I 0.718
POPTR_0010s13290 Populus trichocarpa POPTR_0010s13290 I 0.714
SapurV1A.0078s0260 Salix purpurea SapurV1A.0078s0260 I 0.714
POPTR_0012s05200 Populus trichocarpa POPTR_0012s05200 I 0.710
POPTR_0015s03770 Populus trichocarpa POPTR_0015s03770 I 0.710
SapurV1A.0989s0120 Salix purpurea SapurV1A.0989s0120 I 0.710
SapurV1A.2885s0020 Salix purpurea SapurV1A.2885s0020 I 0.710
SapurV1A.1621s0010 Salix purpurea SapurV1A.1621s0010 I 0.710
SapurV1A.0530s0020 Salix purpurea SapurV1A.0530s0020 I 0.710
GLYMA20G25110 Glycine max GLYMA20G25110 I 0.706
MTR_1g110460 Medicago truncatula MTR_1g110460 I 0.706
LjT44F11.120.nd Lotus japonicus LjT44F11.120.nd I 0.706
gene03712-v1.0-hybrid Fragaria vesca gene03712-v1.0-hybrid I 0.705
SapurV1A.0294s0070 Salix purpurea SapurV1A.0294s0070 I 0.703
Cucsa.213510 Cucumis sativus Cucsa.213510 I 0.702
TCM_012363 Theobroma cacao TCM_012363 I 0.701
POPTR_0008s12130 Populus trichocarpa POPTR_0008s12130 I 0.701
POPTR_0002s19250 Populus trichocarpa POPTR_0002s19250 I 0.700
POPTR_0014s11230 Populus trichocarpa POPTR_0014s11230 I 0.700
GLYMA03G38040 Glycine max GLYMA03G38040 I 0.699
PRUPE_ppa008877mg Prunus persica PRUPE_ppa008877mg I 0.696
Pm025177 Prunus mume Pm025177 I 0.696
PK22268.1 Cannabis sativa PK22268.1 I 0.696
GLYMA10G41930 Glycine max GLYMA10G41930 I 0.696
Gorai.006G060300 Gossypium raimondii Gorai.006G060300 I 0.695
VIT_01s0011g03730 Vitis vinifera VIT_01s0011g03730 I 0.694
GRMZM2G176327 Zea mays GRMZM2G176327 N 0.693
GSMUA_Achr3G21060_001 Musa acuminata GSMUA_Achr3G21060_001 I 0.690
evm.TU.supercontig_49.71 Carica papaya evm.TU.supercontig_49.71 I 0.690
GSMUA_Achr8G18460_001 Musa acuminata GSMUA_Achr8G18460_001 I 0.689
Ca_03536 Cicer arietinum Ca_03536 I 0.689
MYB62 Arabidopsis thaliana AT1G68320 D 0.688
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I 0.688
Bo2g057760 Brassica oleracea Bo2g057760 I 0.688
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I 0.688
Bo6g106730 Brassica oleracea Bo6g106730 I 0.688
Thhalv10018962m.g Eutrema salsugineum Thhalv10018962m.g I 0.688
Bra033948 Brassica rapa Bra033948 I 0.688
Bra004297 Brassica rapa Bra004297 I 0.688
MYB62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001171 I 0.688
Ca_03535 Cicer arietinum Ca_03535 I 0.687
MDP0000259898 Malus domestica MDP0000259898 I 0.687
MDP0000934638 Malus domestica MDP0000934638 I 0.687
Ciclev10021157m.g Citrus clementina Ciclev10021157m.g I 0.686
orange1.1g020603m.g Citrus sinensis orange1.1g020603m.g I 0.686
Bo7g050560 Brassica oleracea Bo7g050560 I 0.685
Bra012482 Brassica rapa Bra012482 I 0.685
PK13281.1 Cannabis sativa PK13281.1 I 0.685
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.685
Solyc05g009230.1 Solanum lycopersicum Solyc05g009230.1 I 0.685
evm.TU.supercontig_145.21 Carica papaya evm.TU.supercontig_145.21 I 0.684
VIT_17s0000g03560 Vitis vinifera VIT_17s0000g03560 I 0.684
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.684
SapurV1A.0014s0140 Salix purpurea SapurV1A.0014s0140 I 0.683
OS07G0688200 Oryza sativa OS07G0688200 I 0.681
ORUFI07G27930 Oryza rufipogon ORUFI07G27930 I 0.681
ORGLA07G0213800 Oryza glaberrima ORGLA07G0213800 I 0.681
BGIOSGA026430 Oryza indica BGIOSGA026430 I 0.681
OBART07G26990 Oryza barthii OBART07G26990 I 0.681
OB07G32480 Oryza brachyantha OB07G32480 I 0.681
OGLUM07G26960 Oryza glumaepatula OGLUM07G26960 I 0.681
OMERI07G23590 Oryza meridionalis OMERI07G23590 I 0.681
ONIVA07G26740 Oryza nivara ONIVA07G26740 I 0.681
AMTR_s00079p00140660 Amborella trichopoda AMTR_s00079p00140660 I 0.681
OPUNC07G25360 Oryza punctata OPUNC07G25360 I 0.681
evm.TU.supercontig_3.502 Carica papaya evm.TU.supercontig_3.502 I 0.680
MTR_1g086510 Medicago truncatula MTR_1g086510 I 0.680
GLYMA10G01330 Glycine max GLYMA10G01330 I 0.680
evm.TU.supercontig_3.501 Carica papaya evm.TU.supercontig_3.501 I 0.680
Cla008412 Citrullus lanatus Cla008412 I 0.680
SapurV1A.0079s0020 Salix purpurea SapurV1A.0079s0020 I 0.680
Bra004041 Brassica rapa Bra004041 I 0.679
Bo6g097180 Brassica oleracea Bo6g097180 I 0.679
Cla017610 Citrullus lanatus Cla017610 I 0.679
Cucsa.365190 Cucumis sativus Cucsa.365190 I 0.679
Carubv10021411m.g Capsella rubella Carubv10021411m.g I 0.678
Cagra.1111s0025 Capsella grandiflora Cagra.1111s0025 I 0.678
Solyc08g008480.2 Solanum lycopersicum Solyc08g008480.2 I 0.677
GSMUA_Achr2G22640_001 Musa acuminata GSMUA_Achr2G22640_001 I 0.677
Ca_05503 Cicer arietinum Ca_05503 I 0.676
Sb03g007360 Sorghum bicolor Sb03g007360 I 0.676
Si030584m.g Setaria italica Si030584m.g I 0.676
OMERI01G01310 Oryza meridionalis OMERI01G01310 I 0.676
Pavir.Ea00660 Panicum virgatum Pavir.Ea00660 I 0.676
LPERR01G01750 Leersia perrieri LPERR01G01750 I 0.676
OB01G11750 Oryza brachyantha OB01G11750 I 0.676
OBART01G01830 Oryza barthii OBART01G01830 I 0.676
Pavir.Eb00654 Panicum virgatum Pavir.Eb00654 I 0.676
GSMUA_Achr3G01370_001 Musa acuminata GSMUA_Achr3G01370_001 I 0.676
BGIOSGA002469 Oryza indica BGIOSGA002469 I 0.676
GRMZM2G096358 Zea mays GRMZM2G096358 I 0.676
GRMZM2G162709 Zea mays GRMZM2G162709 I 0.676
OLONG_008024 Oryza longistaminata OLONG_008024 I 0.676
OGLUM01G02010 Oryza glumaepatula OGLUM01G02010 I 0.676
OS01G0128000 Oryza sativa OS01G0128000 I 0.676
ONIVA01G01990 Oryza nivara ONIVA01G01990 I 0.676
Gorai.008G287100 Gossypium raimondii Gorai.008G287100 I 0.676
ORUFI01G01910 Oryza rufipogon ORUFI01G01910 I 0.676
ORGLA01G0016500 Oryza glaberrima ORGLA01G0016500 I 0.676
cassava46139.m1 Manihot esculenta cassava46139.m1 I 0.675
GLYMA19G40650 Glycine max GLYMA19G40650 I 0.675
evm.TU.contig_30289.2 Carica papaya evm.TU.contig_30289.2 I 0.674
PK21537.1 Cannabis sativa PK21537.1 I 0.674
Gorai.005G068900 Gossypium raimondii Gorai.005G068900 I 0.674
Gorai.011G203900 Gossypium raimondii Gorai.011G203900 I 0.674
gene05018-v1.0-hybrid Fragaria vesca gene05018-v1.0-hybrid I 0.674
mgf015990m Mimulus guttatus mgf015990m I 0.674
MDP0000274300 Malus domestica MDP0000274300 I 0.674
Aquca_003_00440 Aquilegia coerulea Aquca_003_00440 I 0.674
Solyc01g057910.2 Solanum lycopersicum Solyc01g057910.2 I 0.674
VIT_05s0077g00500 Vitis vinifera VIT_05s0077g00500 I 0.674
PGSC0003DMG400005848 Solanum tuberosum PGSC0003DMG400005848 I 0.674
GSMUA_Achr6G09760_001 Musa acuminata GSMUA_Achr6G09760_001 I 0.674
PRUPE_ppa025672mg Prunus persica PRUPE_ppa025672mg I 0.674
PGSC0003DMG400008761 Solanum tuberosum PGSC0003DMG400008761 I 0.674
Bostr.26959s0063 Boechera stricta Bostr.26959s0063 I 0.673
MTR_1g086530 Medicago truncatula MTR_1g086530 I 0.673
MYB2 Oryza sativa OS03G0315400 I 0.672
Sb09g002675 Sorghum bicolor Sb09g002675 I 0.672
Sb09g002680 Sorghum bicolor Sb09g002680 I 0.672
BGIOSGA010857 Oryza indica BGIOSGA010857 I 0.672
ORGLA03G0145100 Oryza glaberrima ORGLA03G0145100 I 0.672
OB03G25040 Oryza brachyantha OB03G25040 I 0.672
Pavir.J03771 Panicum virgatum Pavir.J03771 I 0.672
Pavir.Ca00769 Panicum virgatum Pavir.Ca00769 I 0.672
LPERR03G13320 Leersia perrieri LPERR03G13320 I 0.672
Si022474m.g Setaria italica Si022474m.g I 0.672
GRMZM2G425427 Zea mays GRMZM2G425427 I 0.672
gene25149-v1.0-hybrid Fragaria vesca gene25149-v1.0-hybrid I 0.672
Solyc08g082890.2 Solanum lycopersicum Solyc08g082890.2 I 0.671
MDP0000167107 Malus domestica MDP0000167107 I 0.671
Pm012912 Prunus mume Pm012912 I 0.671
PRUPE_ppa015973mg Prunus persica PRUPE_ppa015973mg I 0.671
PGSC0003DMG400012126 Solanum tuberosum PGSC0003DMG400012126 I 0.671
cassava12704.valid.m1 Manihot esculenta cassava12704.valid.m1 I 0.671
Cla015409 Citrullus lanatus Cla015409 I 0.671
Traes_3DS_A0676BAEA Triticum aestivum Traes_3DS_A0676BAEA I 0.671
Pm029082 Prunus mume Pm029082 I 0.670
cassava28986.valid.m1 Manihot esculenta cassava28986.valid.m1 I 0.670
PRUPE_ppa009143mg Prunus persica PRUPE_ppa009143mg I 0.670
mgf013798m Mimulus guttatus mgf013798m I 0.669
F775_25534 Aegilops tauschii F775_25534 I 0.669
PGSC0003DMG401004611 Solanum tuberosum PGSC0003DMG401004611 I 0.669
mgf015598m Mimulus guttatus mgf015598m I 0.668
PGSC0003DMG400005641 Solanum tuberosum PGSC0003DMG400005641 I 0.667
OGLUM05G02350 Oryza glumaepatula OGLUM05G02350 I 0.667
GRMZM2G330475 Zea mays GRMZM2G330475 I 0.667
BGIOSGA018863 Oryza indica BGIOSGA018863 I 0.667
GSMUA_Achr11G16130_001 Musa acuminata GSMUA_Achr11G16130_001 I 0.667
OB05G12230 Oryza brachyantha OB05G12230 I 0.667
ORGLA05G0022200 Oryza glaberrima ORGLA05G0022200 I 0.667
ONIVA05G02220 Oryza nivara ONIVA05G02220 I 0.667
ORUFI05G02420 Oryza rufipogon ORUFI05G02420 I 0.667
OPUNC05G02190 Oryza punctata OPUNC05G02190 I 0.667
Solyc03g119370.1 Solanum lycopersicum Solyc03g119370.1 I 0.667
Aquca_041_00011 Aquilegia coerulea Aquca_041_00011 I 0.666
TRIUR3_13477 Triticum urartu TRIUR3_13477 N 0.666
cassava39393.m1 Manihot esculenta cassava39393.m1 I 0.665
mgf006108m Mimulus guttatus mgf006108m I 0.665
cassava33046.m1 Manihot esculenta cassava33046.m1 I 0.665
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I 0.665
Bostr.12659s0423 Boechera stricta Bostr.12659s0423 I 0.665
Bostr.15774s0093 Boechera stricta Bostr.15774s0093 I 0.665
Cagra.3474s0016 Capsella grandiflora Cagra.3474s0016 I 0.665
Cucsa.252400 Cucumis sativus Cucsa.252400 I 0.665
Sb02g043420 Sorghum bicolor Sb02g043420 I 0.665
Gorai.006G265800 Gossypium raimondii Gorai.006G265800 I 0.665
TCM_021433 Theobroma cacao TCM_021433 I 0.665
Cla022143 Citrullus lanatus Cla022143 I 0.665
Bo7g092890 Brassica oleracea Bo7g092890 I 0.665
Carubv10026871m.g Capsella rubella Carubv10026871m.g I 0.665
Bra010022 Brassica rapa Bra010022 I 0.665
Thhalv10004588m.g Eutrema salsugineum Thhalv10004588m.g I 0.665
Bra010021 Brassica rapa Bra010021 I 0.665
MYB78 Arabidopsis lyrata fgenesh2_kg.8__837__AT5G49620.1 I 0.665
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.664
Aquca_030_00246 Aquilegia coerulea Aquca_030_00246 N 0.663
GSMUA_AchrUn_randomG27010_001 Musa acuminata GSMUA_AchrUn_randomG27010_001 I 0.663
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.663
GRMZM2G001824 Zea mays GRMZM2G001824 I 0.663
30076.m004607 Ricinus communis 30076.m004607 I 0.663
GSMUA_AchrUn_randomG00010_001 Musa acuminata GSMUA_AchrUn_randomG00010_001 I 0.662
Lus10009037.g Linum usitatissimum Lus10009037.g I 0.662
Solyc12g099130.1 Solanum lycopersicum Solyc12g099130.1 I 0.662
Lus10032129.g Linum usitatissimum Lus10032129.g I 0.662
Lus10014557.g Linum usitatissimum Lus10014557.g I 0.662
Cagra.2231s0026 Capsella grandiflora Cagra.2231s0026 I 0.662
Si035722m.g Setaria italica Si035722m.g I 0.661
Sb01g037110 Sorghum bicolor Sb01g037110 I 0.661
Bo5g043390 Brassica oleracea Bo5g043390 I 0.661
Pavir.J39490 Panicum virgatum Pavir.J39490 I 0.661
GSMUA_Achr10G19840_001 Musa acuminata GSMUA_Achr10G19840_001 I 0.661
Pavir.J28445 Panicum virgatum Pavir.J28445 I 0.661