MDP0000196982 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000196982 T288397_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.789 0.880
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.671 0.630
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.671 0.630
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.666 0.641
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.662 0.663
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000196982 Myb 50 97
MDP0000196982 Myb 103 148

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.841
MDP0000655330 Malus domestica MDP0000655330 I 0.841
MDP0000723614 Malus domestica MDP0000723614 I 0.841
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.838
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.838
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.838
MDP0000791870 Malus domestica MDP0000791870 I 0.832
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.832
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.832
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.832
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.826
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.826
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.826
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.815
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.812
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.811
TCM_024180 Theobroma cacao TCM_024180 I 0.811
VIT_06s0004g00570 Vitis vinifera VIT_06s0004g00570 I 0.810
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.806
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I 0.804
GLYMA13G09980 Glycine max GLYMA13G09980 I 0.801
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.801
GLYMA14G24500 Glycine max GLYMA14G24500 I 0.801
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.801
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.800
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.800
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.798
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.797
MTR_3g083540 Medicago truncatula MTR_3g083540 I 0.796
TCM_025910 Theobroma cacao TCM_025910 I 0.796
LjT20L14.140.nd Lotus japonicus LjT20L14.140.nd I 0.795
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.794
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.794
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.789
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I 0.787
Gorai.007G260600 Gossypium raimondii Gorai.007G260600 I 0.771
POPTR_0019s05200 Populus trichocarpa POPTR_0019s05200 I 0.770
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.770
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.770
POPTR_0019s05190 Populus trichocarpa POPTR_0019s05190 I 0.770
AMTR_s00068p00092800 Amborella trichopoda AMTR_s00068p00092800 I 0.768
AMTR_s00068p00097220 Amborella trichopoda AMTR_s00068p00097220 I 0.768
evm.TU.supercontig_51.138 Carica papaya evm.TU.supercontig_51.138 I 0.766
PK13689.1 Cannabis sativa PK13689.1 I 0.760
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.758
Bra039395 Brassica rapa Bra039395 I 0.757
Aquca_009_00496 Aquilegia coerulea Aquca_009_00496 I 0.757
Bo1g138250 Brassica oleracea Bo1g138250 I 0.754
Bra027423 Brassica rapa Bra027423 I 0.743
ATMYB5 Arabidopsis lyrata scaffold_301556.1 I 0.743
Bostr.3640s0147 Boechera stricta Bostr.3640s0147 I 0.743
Thhalv10022057m.g Eutrema salsugineum Thhalv10022057m.g I 0.743
MYB5 Arabidopsis thaliana AT3G13540 I 0.743
GRMZM2G395672 Zea mays GRMZM2G395672 I 0.742
mgf001865m Mimulus guttatus mgf001865m I 0.740
cassava27189.m1 Manihot esculenta cassava27189.m1 I 0.739
Cagra.0690s0007 Capsella grandiflora Cagra.0690s0007 I 0.732
Carubv10014443m.g Capsella rubella Carubv10014443m.g I 0.732
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.730
GSMUA_Achr10G14030_001 Musa acuminata GSMUA_Achr10G14030_001 I 0.723
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.723
AMTR_s00068p00118480 Amborella trichopoda AMTR_s00068p00118480 I 0.722
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.722
GSMUA_Achr5G06530_001 Musa acuminata GSMUA_Achr5G06530_001 I 0.722
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.719
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.719
Si004316m.g Setaria italica Si004316m.g I 0.719
Pm018338 Prunus mume Pm018338 I 0.719
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.719
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.719
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.719
PK14784.1 Cannabis sativa PK14784.1 I 0.719
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.719
MDP0000915330 Malus domestica MDP0000915330 I 0.719
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.716
POPTR_0003s14430 Populus trichocarpa POPTR_0003s14430 I 0.716
GSMUA_Achr6G14840_001 Musa acuminata GSMUA_Achr6G14840_001 I 0.711
LjSGA_023691.1 Lotus japonicus LjSGA_023691.1 I 0.711
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.710
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.709
AMTR_s00024p00250970 Amborella trichopoda AMTR_s00024p00250970 I 0.709
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.707
Ca_01329 Cicer arietinum Ca_01329 I 0.707
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.707
GSMUA_Achr7G13700_001 Musa acuminata GSMUA_Achr7G13700_001 I 0.704
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.703
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.702
30068.m002544 Ricinus communis 30068.m002544 I 0.702
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.702
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.702
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.702
PK23594.1 Cannabis sativa PK23594.1 I 0.702
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.701
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.698
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.698
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.698
evm.TU.supercontig_51.139 Carica papaya evm.TU.supercontig_51.139 I 0.698
Traes_1AS_36AF74187 Triticum aestivum Traes_1AS_36AF74187 I 0.695
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I 0.693
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.693
POPTR_0002s17460 Populus trichocarpa POPTR_0002s17460 I 0.693
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.693
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.692
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.691
Ca_17627 Cicer arietinum Ca_17627 I 0.691
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I 0.690
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.689
BRADI2G47367 Brachypodium distachyon BRADI2G47367 I 0.687
GSMUA_Achr2G19380_001 Musa acuminata GSMUA_Achr2G19380_001 I 0.687
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.686
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.686
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.686
mgf015598m Mimulus guttatus mgf015598m I 0.685
mgf006108m Mimulus guttatus mgf006108m I 0.685
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.684
MDP0000887107 Malus domestica MDP0000887107 I 0.684
MDP0000140609 Malus domestica MDP0000140609 I 0.684
gene25098-v1.0-hybrid Fragaria vesca gene25098-v1.0-hybrid I 0.684
TCM_015685 Theobroma cacao TCM_015685 I 0.683
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.682
MDP0000157940 Malus domestica MDP0000157940 I 0.681
POPTR_0015s03770 Populus trichocarpa POPTR_0015s03770 I 0.680
Bo7g088650 Brassica oleracea Bo7g088650 I 0.680
GLYMA16G02570 Glycine max GLYMA16G02570 I 0.680
GLYMA07G05960 Glycine max GLYMA07G05960 I 0.680
SapurV1A.0530s0020 Salix purpurea SapurV1A.0530s0020 I 0.680
cassava12704.valid.m1 Manihot esculenta cassava12704.valid.m1 I 0.680
Bo9g009020 Brassica oleracea Bo9g009020 I 0.680
SapurV1A.1621s0010 Salix purpurea SapurV1A.1621s0010 I 0.680
TCM_012363 Theobroma cacao TCM_012363 I 0.680
SapurV1A.2885s0020 Salix purpurea SapurV1A.2885s0020 I 0.680
POPTR_0012s05200 Populus trichocarpa POPTR_0012s05200 I 0.680
Bra025410 Brassica rapa Bra025410 I 0.680
SapurV1A.0989s0120 Salix purpurea SapurV1A.0989s0120 I 0.680
evm.TU.supercontig_3.501 Carica papaya evm.TU.supercontig_3.501 I 0.680
evm.TU.supercontig_3.502 Carica papaya evm.TU.supercontig_3.502 I 0.680
MLOC_66662 Hordeum vulgare MLOC_66662 I 0.678
Eucgr.E01031 Eucalyptus grandis Eucgr.E01031 I 0.677
Eucgr.D01701 Eucalyptus grandis Eucgr.D01701 I 0.677
Gorai.003G021100 Gossypium raimondii Gorai.003G021100 I 0.676
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.675
PRUPE_ppa018430mg Prunus persica PRUPE_ppa018430mg I 0.675
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.675
MDP0000259898 Malus domestica MDP0000259898 I 0.675
Pm024189 Prunus mume Pm024189 I 0.675
PK22268.1 Cannabis sativa PK22268.1 I 0.675
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.675
Pm025177 Prunus mume Pm025177 I 0.675
PRUPE_ppa008877mg Prunus persica PRUPE_ppa008877mg I 0.675
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.674
TCM_005112 Theobroma cacao TCM_005112 I 0.674
PGSC0003DMG400005848 Solanum tuberosum PGSC0003DMG400005848 I 0.673
Pm027048 Prunus mume Pm027048 I 0.673
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.673
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.673
Thhalv10018962m.g Eutrema salsugineum Thhalv10018962m.g I 0.671
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I 0.671
LjT44F11.120.nd Lotus japonicus LjT44F11.120.nd I 0.671
SapurV1A.0078s0260 Salix purpurea SapurV1A.0078s0260 I 0.671
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I 0.671
evm.TU.supercontig_798.1 Carica papaya evm.TU.supercontig_798.1 I 0.671
Pavir.J31180 Panicum virgatum Pavir.J31180 I 0.671
Gorai.002G218600 Gossypium raimondii Gorai.002G218600 I 0.671
Lus10041435.g Linum usitatissimum Lus10041435.g I 0.671
VIT_01s0011g03730 Vitis vinifera VIT_01s0011g03730 I 0.671
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.671
Bo6g097180 Brassica oleracea Bo6g097180 I 0.671
GLYMA20G25110 Glycine max GLYMA20G25110 I 0.671
Bo2g057760 Brassica oleracea Bo2g057760 I 0.671
Solyc05g009230.1 Solanum lycopersicum Solyc05g009230.1 I 0.671
Solyc03g119370.1 Solanum lycopersicum Solyc03g119370.1 I 0.671
PGSC0003DMG400005641 Solanum tuberosum PGSC0003DMG400005641 I 0.671
Bo6g106730 Brassica oleracea Bo6g106730 I 0.671
MYB62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001171 I 0.671
GLYMA10G41930 Glycine max GLYMA10G41930 I 0.671
MTR_1g110460 Medicago truncatula MTR_1g110460 I 0.671
Bra033948 Brassica rapa Bra033948 I 0.671
Bra004041 Brassica rapa Bra004041 I 0.671
Bra004297 Brassica rapa Bra004297 I 0.671
TCM_009642 Theobroma cacao TCM_009642 I 0.671
POPTR_0010s13290 Populus trichocarpa POPTR_0010s13290 I 0.671
Ca_05503 Cicer arietinum Ca_05503 I 0.671
Cla019255 Citrullus lanatus Cla019255 I 0.671
MYB62 Arabidopsis thaliana AT1G68320 D 0.671
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.671
Bostr.26959s0063 Boechera stricta Bostr.26959s0063 I 0.671
Solyc08g008480.2 Solanum lycopersicum Solyc08g008480.2 I 0.670
Pm005571 Prunus mume Pm005571 I 0.669
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.668
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I 0.668
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.668
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.668
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I 0.668
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.668
F775_14949 Aegilops tauschii F775_14949 I 0.667
Traes_4DL_9023F3504 Triticum aestivum Traes_4DL_9023F3504 I 0.667
ORGLA03G0145100 Oryza glaberrima ORGLA03G0145100 I 0.667
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.667
BGIOSGA010857 Oryza indica BGIOSGA010857 I 0.667
LPERR03G13320 Leersia perrieri LPERR03G13320 I 0.667
BRADI1G64140 Brachypodium distachyon BRADI1G64140 I 0.667
MYB2 Oryza sativa OS03G0315400 I 0.667
POPTR_0008s12130 Populus trichocarpa POPTR_0008s12130 I 0.667
Traes_4AS_E4294BADC Triticum aestivum Traes_4AS_E4294BADC I 0.667
OB03G25040 Oryza brachyantha OB03G25040 I 0.667
GSMUA_Achr11G16130_001 Musa acuminata GSMUA_Achr11G16130_001 I 0.667
cassava46139.m1 Manihot esculenta cassava46139.m1 I 0.667
AMTR_s00079p00140660 Amborella trichopoda AMTR_s00079p00140660 I 0.666
GSMUA_Achr3G21060_001 Musa acuminata GSMUA_Achr3G21060_001 I 0.666
MLOC_16037 Hordeum vulgare MLOC_16037 I 0.666
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I 0.666
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I 0.666
VIT_17s0000g03560 Vitis vinifera VIT_17s0000g03560 I 0.666
ATMYB121 Arabidopsis thaliana AT3G30210 D 0.666
Lus10034338.g Linum usitatissimum Lus10034338.g I 0.666
SELMODRAFT_98669 Selaginella moellendorffii SELMODRAFT_98669 I 0.665
SELMODRAFT_127220 Selaginella moellendorffii SELMODRAFT_127220 I 0.665
Carubv10018530m.g Capsella rubella Carubv10018530m.g I 0.663
TRAES3BF026500080CFD_g Triticum aestivum TRAES3BF026500080CFD_g I 0.663
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I 0.663
BGIOSGA002469 Oryza indica BGIOSGA002469 I 0.662
MYB3 Arabidopsis thaliana AT1G22640 D 0.662
Bo8g071580 Brassica oleracea Bo8g071580 I 0.662
Bo7g057770 Brassica oleracea Bo7g057770 I 0.662
Bra012337 Brassica rapa Bra012337 I 0.662
Thhalv10008456m.g Eutrema salsugineum Thhalv10008456m.g I 0.662
ATMYB3 Arabidopsis lyrata fgenesh2_kg.1__2457__AT1G22640.1 I 0.662
ONIVA01G01990 Oryza nivara ONIVA01G01990 I 0.662
PGSC0003DMG400012126 Solanum tuberosum PGSC0003DMG400012126 I 0.662
OS01G0128000 Oryza sativa OS01G0128000 I 0.662
ORUFI01G01910 Oryza rufipogon ORUFI01G01910 I 0.662
ORGLA01G0016500 Oryza glaberrima ORGLA01G0016500 I 0.662
Sb03g007360 Sorghum bicolor Sb03g007360 I 0.662
Solyc08g082890.2 Solanum lycopersicum Solyc08g082890.2 I 0.662
Carubv10009761m.g Capsella rubella Carubv10009761m.g I 0.662
Cagra.0114s0040 Capsella grandiflora Cagra.0114s0040 I 0.662
Bostr.12659s0116 Boechera stricta Bostr.12659s0116 I 0.662
GRMZM2G096358 Zea mays GRMZM2G096358 I 0.662
OMERI01G01310 Oryza meridionalis OMERI01G01310 I 0.662
Pavir.Eb00654 Panicum virgatum Pavir.Eb00654 I 0.662
LPERR01G01750 Leersia perrieri LPERR01G01750 I 0.662
GRMZM2G162709 Zea mays GRMZM2G162709 I 0.662
GSMUA_Achr6G09760_001 Musa acuminata GSMUA_Achr6G09760_001 I 0.662
OLONG_008024 Oryza longistaminata OLONG_008024 I 0.662
Pavir.Ea00660 Panicum virgatum Pavir.Ea00660 I 0.662
OGLUM01G02010 Oryza glumaepatula OGLUM01G02010 I 0.662
OBART01G01830 Oryza barthii OBART01G01830 I 0.662
OB01G11750 Oryza brachyantha OB01G11750 I 0.662
GSMUA_Achr3G01370_001 Musa acuminata GSMUA_Achr3G01370_001 I 0.662
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.661
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.661